LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g01081	ATGGATAAAGACAAAACCTCACAACTCCCAAGAAGAACGACCAGGTCCTCAACTTCATCTCCCACATCCACTTCAAATAATGTAATTGCACCAAAAGTAAATAGTCTTGAACCTCTAACAATCAACGATCTTTTAGTTGGAGGAGACCCAATCAGTCTAGATGACATAATTTCTGACTTTCCTGGTAGAAGAAGCCAGATTCTTGAGATTGTGCGTCTTTTGGGACCTTTGAATTCACCAATGCTTCCATTGTTCGTATATGGAGGTTCTTCTACTGGAAAAACCAGTATTATTCTTCAATTGTTCAGGCATCTCAACAGGCCTCTCATTTATTCTAGTTGTAGGACATGTTATAACCAGGGTATCTTGTTTGAATCTATTCTAAATCAGTTATTTCTCCATAGAAAGAATGCTGCCAATGCTTATGCAAATGCAAAACGCTGTGAAAGACCATCTGATTTTGTCAACTTTCTTCGGGAAGCATTGACTAATGTCATAATTAATCTTAAGGAGAAGTCAGAGAAGTTAGTCTCAAATAAGATGACACAAGGGAAAATTGGAAACATGATCTATTTGATGTTTGACAATTTTCATCTTGTTAGGGAGTGGGATAAGAGTTCTACTATAGTGCCCTTGCTGTTTAATCTCTATGATATGCTAAAGATGCCTGAAGTGGGTCTGATTTTTATAAGCAGTACTTCCCCAGACACATTTTACTCTAACATGGGCTATGTAGAGCCTATCCCCATTTACTTTCCTGATTATACAGAAGGTGATATTCGTCAAATATTATTGAGAAACCAAGTGAACCCGAAGCTATATTCCTCATTTCTTGATGTAGCTCTGAAGTCTTTTTATGGAATTACTAAGCAGGTTGGTGATTTGTCTGCTGCCTTAAAGCCACTATATGAAAAATATTGCGAACCTTTAAGTGATAAGGGAAAAGGAGTTGCTCCTAATCAAGAGATGAGGCGAAGGCTGCTTGCTCATATCAACCCTCATATTGGCCCCGCTTTGAATGAGATATTTAAGGTTTCATCTCCTTCTTCAATTGAAGTGGAGACCCGTAAAGAGGAAAAGCGGAAGGGAAATCCCGGGAGATTGGAGCAATGTGAAGAATTAGGCAGTCTTGATTTTCATATGTCTACTAGTGCAAAGTATCTTCTGATTTCAGCATTTCTTGCCTCCAGAAACCCAGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGTGGTTCTGATAATCGAAAGCGGAAGAGGAAGCCTTCTGAGAAATCGATGGAACGGAAGGAAACTTTAGAAGAGGAGCTACTAATGAAAGGACCGGGAACTTTCCCGTTGGAGAGGTTATTAGCCATCTTTCAGTGCCTTGTATCAGTCGCAGAAGATGAAGAGGAACCAAACAATGATGGATTTGGAGTTGAAGGTGGCAATGGTGGTCTGATGTCCGACGTTCTTTTGCAACTGTCTAGTCTCTGCAATGCTAATTTTATATTCAAAGGTAGAAGCTGTCCAATTGAGGGCTCAACCCGGTATCGATCAACCATATCCGAAGACCTGGCTTTGAAGGTTGCAAGGAGCCTTAAGTTCCCATTATCGAAGTATTTGTATAGAAGTTAG	1620	0.3981	MDKDKTSQLPRRTTRSSTSSPTSTSNNVIAPKVNSLEPLTINDLLVGGDPISLDDIISDFPGRRSQILEIVRLLGPLNSPMLPLFVYGGSSTGKTSIILQLFRHLNRPLIYSSCRTCYNQGILFESILNQLFLHRKNAANAYANAKRCERPSDFVNFLREALTNVIINLKEKSEKLVSNKMTQGKIGNMIYLMFDNFHLVREWDKSSTIVPLLFNLYDMLKMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEGDIRQILLRNQVNPKLYSSFLDVALKSFYGITKQVGDLSAALKPLYEKYCEPLSDKGKGVAPNQEMRRRLLAHINPHIGPALNEIFKVSSPSSIEVETRKEEKRKGNPGRLEQCEELGSLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKSMERKETLEEELLMKGPGTFPLERLLAIFQCLVSVAEDEEEPNNDGFGVEGGNGGLMSDVLLQLSSLCNANFIFKGRSCPIEGSTRYRSTISEDLALKVARSLKFPLSKYLYRS	539

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g01081	539	PANTHER	ORIGIN RECOGNITION COMPLEX SUBUNIT 5	52	538	IPR020796	GO:0000808\|GO:0005634\|GO:0006260
	Spst1g01081	539	MobiDBLite	consensus disorder prediction	410	437	-	-
	Spst1g01081	539	MobiDBLite	consensus disorder prediction	404	437	-	-
	Spst1g01081	539	MobiDBLite	consensus disorder prediction	1	29	-	-
	Spst1g01081	539	Gene3D	-	55	242	IPR027417	-
	Spst1g01081	539	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	54	274	IPR027417	-
	Spst1g01081	539	FunFam	Origin of replication complex subunit 5	60	241	-	-
	Spst1g01081	539	Pfam	Origin recognition complex (ORC) subunit 5 C-terminus	250	536	IPR047088	-
	Spst1g01081	539	MobiDBLite	consensus disorder prediction	11	29	-	-
	Spst1g01081	539	Pfam	AAA ATPase domain	60	206	IPR041664	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst1g01081	3	538	Core DNA Replication Machinery Family	AT4G29910	58.303	0.0	627

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g01081	K02607		-	gmx:100782175	917.916