Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01076 AGCATATGGATTGAGAAGGCTTTTAGAGACATAGAAGAATCCAAAGTCCAAATGACTAAAGGCAGAAAGTGTGAAGAGAAGAGGAGTTATGCATCCAAAACTGGATCACTCAATCAAGTTGCATATTCTTCTGTTTCCACTGGAAAGCCAGATTTCTGTGCTCTAAGAGAGAAGATGATTGAGCTGATCGACTGTGTCACGCAAGAGGGGATTTTGAAATCAACTGTGACATTCATCATGACAAAGAGGTCCCAGAGATTCCCTGTGAATTATGAGAAAGACCAGTCAGGATGTATGTGGGGTTTTATTAGTATATTTGATTTTCGTCATGCCCGCTGTACTCGGAAATTGATAGCAGATAAGAGGCATGGAAGCAAGCATGCTCTTGGTGCTGCACTTACCAAGAACAAGTTTGAAGTGTTGAGCAATTTGGATGAAGACTATCAAGGCAATTTCGACAGGGGAGAGAGTAAGAGACTAACACTGACAACTGATGGTGATAAGCTTAGTGTGAAGAAACTGATAGAAGAAGAAATGATCATTGACCAGGATGAAATAAAGGATCAAGGTAAAGAGTTTGTAGAATCAAAGCAAAAGCAATCCAGATTAGGGCGTGAAGATCCTCCAAAGAAAGATTCCAAAAGGAAAAAGAAATCTCGCAAGAAAAACCGTGATATGGGCAGCCGTGATTTGAATTCAGATGCAACCTTGAAATCTGAATTTTTACACAAGCAGCATTCAAGGGATCAGTCAAAAGATACTCTAGATTTGGACGAAATAATGAATGATTTTTGTCATGTTGAAGCTGCTTGTTCCATGATGAATGACGATGATTGCAAAATTGATGCACAGTCAAACCAAAAGAATGTTATGTCTGAAAACCTTGCTAATGCAATCCATGAATTTGTGAATCAGATGAGATTGAATGGTAAAGATCTGCCTGAAGATGGACAATTCCTTAGCTCACATGAACTCATGGAAGCACTTCAGGTTATAAGTTCAGATAAGCAATTGTTCCTTAGACTTCTTCAAGACCCAAATTCACACTTGCTGAAATACATTCAGGAGTTGGAAAATGCTAAAGGGGGAGATGGCAAAATATGCTCTTCACTTAGTGGCTCCAACTGCTCTGAACAAGAACTTGTTAATCTGAAACAAACTAGGGAGAGTGCCAACCGTAAGCATCTTAACTTTTTCAGGAAAAGGGGGAAGTCTCAATCAAAAAATGCAACAAATGAAAATGGGAAAACTGAGTTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAACAGGCATGCAAATTTCTGAAAATGGAAGCAACCTTGCCTCATCTCTAGATTCTCATGATATTGCCCATTACAAAGGCCCTTCTGTGAGAGTTGGTTCTCATTTTTCTCTTACAGAAATAAAAAGGAAACTGAAACATGCTATGGGAAAGGAGAGGCATGGAAACCCTGAAGTGATATCACGAAAACTCCCTGTTGAACGTCAAAATAAGGTGCCAAGAGGCAAATGCAAAGATAATACTGGAATGAGATCTCCTAATAAAGACCATTTCTTCATTGAAAAGATTGCAAGACCTATGTTTGATGTTGTGAAAGGAAACAAGACTGATACATTGAAAGACTCCGAATTGAACGTGCAACATGAACGTGGTATTCCCAAGCAAAGTGCTTCTAACATATATGTTGAGGCTAGGAAACATCTGTCTGAGATGCTAGATAATGCTGATGAGAACACAAACATTTCAAGCGGGCAGATTCCCAAGACCCTTGGGAGAATACTTTCTCTTCCCGAGTACAACTTTTCACCTGTAGAAAGTCCTGCAAGGAATTTGGAAGATCATTCTGTGACTGCACCGGCCAGATTTTCTTCCTCAGGCAAAACTAGCGAAGTTAGTGATGATAATTTGTCCCCAAAACCCGCAAACTCTAGTGGTATTCCAGATCAGGAAACTTCCAAATCAGAAAAACAGTCAAGCATTTGTGATGAAATCTCTAATAATAAAGTACAGGAAATTAAGTCAATGTCAAATTTCTCCCATGATGATGGTATTGTTGATTCATCTGAAGCCTGTTGTCCTATCAAAGATGAGATAGTTATTGAAGACAATGTTGCATCTGCGGAAGAGAAAAATAAATTGAAATCATTTTTGGATCCAAATGGCTTCATAATAGGAAAGAACCAAAATATTGATATCTCAGAAATTCAGGATGGTGCACAATGTTCTGGATGTTTGAATCAGGATATAATAGAAGAGAACAAACTATCATCTCTCCCTTCGTCTCCTCACTCTTCGATCACTAAGAAAAATGAAGAGCTAGACTGTGGGACAGATATATCCGGGCGACCAAGTCCTGTATCTGTTCTTGATACATCATTTTCAGATGATGACTTTGGCCCTGGACACTCCAGATGTCAACCTGTTAAGTTACCAGTACAACCTCTACAAATTCAATTTGAAGAACACGATTCTTCACCTGCAGAGCAATTTGACACGGGAAAATATAGTTTTGAAGAAAAGGAGTTGATATATGACTACATCAAAGTTGTCTTGCATGCCTCTGGTTTGACAAGAGATCAGTTGATGGTGAAATGCCTTACCTCTGACAAGATAATAGATCCTTCTTTGTTTGATCAGGTAGAGTTCTTCTCGAACCTGCGTTGCCACGATCGGAGGCTCCTATTTGACTCTGTCAATGAAGTTCTCATGGAGGTTTGCCAGCATTACTTTGGGGTCTCACCTTGGGTTTCATTTGTATATCCTAGCATGAGGCCAGCTCCAAGTATGAAAAGGGTTACATTCAAGGTCTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTGCCCCCACCTCGCACTTTGGAGCAAATTGTTAGGAAAGACATGGCAAAAAGGGGAACTTGGATGGACCTTGAACTTGATGCTGAAGCAATTGGTTTTGAAATGGGAGAGGCCATTCTTACTGAACTGATGGAAGACACAATCTTGAGCCTTGTGAGTGAAAGTCCAGAGAGTAAATGTTCTGTGCTTCAATTTGAGTTGAAGGAACAATGA 3057 0.3981 SIWIEKAFRDIEESKVQMTKGRKCEEKRSYASKTGSLNQVAYSSVSTGKPDFCALREKMIELIDCVTQEGILKSTVTFIMTKRSQRFPVNYEKDQSGCMWGFISIFDFRHARCTRKLIADKRHGSKHALGAALTKNKFEVLSNLDEDYQGNFDRGESKRLTLTTDGDKLSVKKLIEEEMIIDQDEIKDQGKEFVESKQKQSRLGREDPPKKDSKRKKKSRKKNRDMGSRDLNSDATLKSEFLHKQHSRDQSKDTLDLDEIMNDFCHVEAACSMMNDDDCKIDAQSNQKNVMSENLANAIHEFVNQMRLNGKDLPEDGQFLSSHELMEALQVISSDKQLFLRLLQDPNSHLLKYIQELENAKGGDGKICSSLSGSNCSEQELVNLKQTRESANRKHLNFFRKRGKSQSKNATNENGKTEFSNRIVILKPALTGMQISENGSNLASSLDSHDIAHYKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPEVISRKLPVERQNKVPRGKCKDNTGMRSPNKDHFFIEKIARPMFDVVKGNKTDTLKDSELNVQHERGIPKQSASNIYVEARKHLSEMLDNADENTNISSGQIPKTLGRILSLPEYNFSPVESPARNLEDHSVTAPARFSSSGKTSEVSDDNLSPKPANSSGIPDQETSKSEKQSSICDEISNNKVQEIKSMSNFSHDDGIVDSSEACCPIKDEIVIEDNVASAEEKNKLKSFLDPNGFIIGKNQNIDISEIQDGAQCSGCLNQDIIEENKLSSLPSSPHSSITKKNEELDCGTDISGRPSPVSVLDTSFSDDDFGPGHSRCQPVKLPVQPLQIQFEEHDSSPAEQFDTGKYSFEEKELIYDYIKVVLHASGLTRDQLMVKCLTSDKIIDPSLFDQVEFFSNLRCHDRRLLFDSVNEVLMEVCQHYFGVSPWVSFVYPSMRPAPSMKRVTFKVWEGVCWHVLPLPPPRTLEQIVRKDMAKRGTWMDLELDAEAIGFEMGEAILTELMEDTILSLVSESPESKCSVLQFELKEQ 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01076 1018 MobiDBLite consensus disorder prediction 607 663 - -
Spst1g01076 1018 MobiDBLite consensus disorder prediction 191 213 - -
Spst1g01076 1018 Pfam Protein of unknown function (DUF3741) 304 348 IPR022212 -
Spst1g01076 1018 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 80 999 - -
Spst1g01076 1018 MobiDBLite consensus disorder prediction 224 254 - -
Spst1g01076 1018 MobiDBLite consensus disorder prediction 619 663 - -
Spst1g01076 1018 Pfam Domain of unknown function (DUF4378) 847 994 IPR025486 -
Spst1g01076 1018 Coils Coil 374 394 - -
Spst1g01076 1018 MobiDBLite consensus disorder prediction 757 779 - -
Spst1g01076 1018 MobiDBLite consensus disorder prediction 191 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01076 Spst-Chr1 13190062 13199646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01076 80 982 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.189 1.50e-102 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01076 - - gmx:100783243 1498.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01076 1 13190062 13199646 Spst1g01076 1 13190062 13199646 ECH
Spst1g01076 1 13190062 13199646 Spst4g01830 4 58553029 58556954 PCT