Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01069 ATGCTGTTATTAGTGTCAGCAAATGGTATGGCACTTGTTAAGGTCACAAATTCATTGGATGGAAATTTGGACTTAACAATTTATTGCAACAATCTTGATCCTACACCTCACCTTATTCACCCTGGTACTTCCTATGAGTTGAATAGTTCTGGTGGTAACTCGTTTCGAAAGCCACCATTCTTTTGTTTCTTCCAATGGAAAGGTGCATTTCACAACTTTGATATGTGCGTGCCAAGTCAGGGTGGAGGTTGCCAACAGTGCAATTGGTTGATAAGTCAAGTTGGACCATGTAGGTACCAAGTGTCAGCAAAAAATGGTATGGCACTTGTTAAGGTCACAAATTCATTGGATGGAAATTTGGACTTAACAATTTATTGCAACAATCTTGATCCTACACCTCACCTTATTCACCCAGTCAGGGTGGAGGTTGCCAACAGTGCAATTGGTTGA 450 0.4067 MLLLVSANGMALVKVTNSLDGNLDLTIYCNNLDPTPHLIHPGTSYELNSSGGNSFRKPPFFCFFQWKGAFHNFDMCVPSQGGGCQQCNWLISQVGPCRYQVSAKNGMALVKVTNSLDGNLDLTIYCNNLDPTPHLIHPVRVEVANSAIG 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01069 149 PANTHER - 13 100 IPR010264 -
Spst1g01069 149 Pfam Plant self-incompatibility protein S1 13 103 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01069 Spst-Chr1 13030096 13034445 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01069 8 98 Carbohydrate Esterase AT3G16970 30.000 3.51e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01069 - K14020 pvu:PHAVU_008G063300g 149.828