Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01037 ATGGCTTATAGTTTGCCGCAGTCTAGAATGTTGCACGGAGATGTGGGGACGAGTTACAGACGCGGATCAGTTGGGCAGTTAGGTTGCTTTGATTTTAGAGGGAGAGGTATTGGTTGTGGTGTTTTTGGCAACTCGAGAAGTGTTTCAAAATTTCGTGTTAGTGGGATGAGGGTTTCTGCTTGTTGGAGTAATTCGAGAGTGGTTACTGGTAGGGAGTTGAAAGTTTTGAATATTAAGAGAAGTTTGTCTTGCAAGAATAGTAATCTTATTATGGGGTCTAGAGCGATTTGGTCGAAGTGCCAGGGTAATGATTCGTTAGCTTATGTAAATGGCAACAGCCGGAATGTTGATTGTGTGGAAGGTTCAGGTGAGGATGCGGGATTGGGACCTGTTTCTAGTGCTGAACTGGATGCACCTTTGGAAGAAGAAGAGGTGCAAGCCGGGAGGAAAGAGGAAGGGGGTGAAATAGGACTGGAGGAACACAGTGTGGATGAATTGAAAGAACTTTTGCAAAAGGCCTTGAAGGAGCTAGAAGTAGCTCAAATAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTTTTTGCATGATGCAGCTGTGATTTCATGGAATGATGTTAATGCTGCCCTTGATACCATCCAAGAAATAGCTAATGAAGAACTTATGGCCAAAGAAGCTGTCCAGAATGCAACAATGGCCCTTTCATTGGCTGAGGCAAGGCTTCAAGTAGCCATAGAATCTCTGGGGCCTGCAAAAGAAGTTCCTGATTCGTCACAAGGTTTTAATGAGAGCAATGGCGATAAGAACACAGAGGAAGTGGAGAAAGCCATTTTGTTTGCTCAAGAAGATATCAAGGAATGCCAGGCTAATTTAGCCAATTGTGAGGCAGAGCTGAGGCGCTTGCAAAATAGGAAGGAAGAGTTGCAGAAGGAAGTCAGCAAATTGCAAGAAATTGCTGAAACAGCTCAGCTGAATGCTGTGAAAGCTGAAGAGGATGTCACGAACATAATGCTGTTGGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCAACAAAACGTGTGAATGATGCAGAGATTGCCTTACAGCGAGCAGAGAAGTCTAATTCTAATTCAAATGCTGATACCATAGAAACAACACAAGCACAGGATGGTGTGGCTATTCTTGAGGAGGAGAAATCGATTCACTGTTTTTCTTCTGATGGCACAGTTGAAAGAGACAAAGATTTGGCAATTGATGATGAATCTTTGGTTGCCAAGTTATCACCTGAAACACTGTCTGATAAAGCCAGCCAAATTTTGGAAGACAAAACACAGTCTGATTATTTAAGTGATAATGAGAATGCTGTGCAAACGAAAAAGCAGGAAACACAGAAAGATTTGGCCAGAGATAGTTCACCTTTCGCTCCCAAGGCATTATTGAAAAAGTCTTCTAGATTCTTTTCTGCATCATTCTTCTCTTTCACTGAAGATGGGACTGAGTTCACGCCAGCATCAGTCTTCCAGGGCCTTATATTATCTGTACAGAAGCAGTTGCCGAAGCTGATATTTGGGTTATTGTTAATGGGAGCAGGGGTTACCTTCTTTGCTAATAGAGTGGAGAGAAATGCTCAGCTGCTTCCACAGGCAGATGTTATCATGACCAGTGTTGAAGAAGTTTCCTCTAGTGCAAGGCCTCTGGTTAGACACCTTCAGAAACTCCCGAAGAAAATCAAGAAAATCATTGCATCATTACCTCAACAAGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGATATGCTCTGGCTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAGAAAATCCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCCGCTGGTATCTTGATTGGGCCATATGGTCTCTCTATCATTCGTCATGTTCATGGGACAAAAGCAGTAGCTGAATTTGGAGTTGTTTTCCTTCTATTCAATATTGGCCTGGAGGTGGGGATGCCTCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCACAGGTTTTGGCAACTGCTGTAGCTATTGGCTTGGTGGTTCATTTTATTTGTGGCCAACCTGGTCCTGCTGCTATTGTCGTTGGTAATGGCCTTGCATTATCATCTACTGCTGTTGTTCTACAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGTCGAGCTACTTTTTCTGTGTTACTTTTTCAGGATCTGGCAGTCGTGGTGTTGCTAATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTCCAAGCTATTGCTGAAGCACTTGGAATGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCTGGGGGACGATTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCTGAAATTTTCTCAGCCAATACACTCCTTGTTATTCTTGGCACAAGTCTTCTTACAGCCAGGGCAGGACTCTCCATGGCATTGGGAGCCTTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCATTACAGGTTGAATCTGACATTGCTCCATATCGCGGCCTTCTTTTGGGGCTGTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTATCAAACTTCCCAGTTATTGCAGTCACACTAGGACTCTTAATTTGTGGCAAGACTATCTTGGTTTCTTTGATGGGTAGAATGTTTGGGATTTCCCTCATTTCTGCCATCAGAGCCGGTCTTCTTCTTGCTCCTGGTGGAGAGTTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTGCCCAGCTGTCATCTTTGCTGTTTCTTGTTGTGGGGATTTCAATGGCTATCACACCATGGTTAGCTGCTGGAGGCCAACTGATTGCTTCCCGTTTTGAGCAGAATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACGGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTGGGCCAGATCATTGCCCAACTTCTTTCTGAGCGTCTTATTCCGTTTGTCGCACTAGATGTAAGAAGTGATAGAGTGGCAGTTGGGCGTGGTCTGGGTCTTCCCGTGTACTTTGGAGATGCTGGTAGTAGAGAGGTCTTACATAAGATTGGAGCTGAAAGGGCATGTGCTGCAGCAATAACACTTGATACACCCGGTGCAAATTATAGAACAGTCTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACCTTTGTCCGTGCCCATGATGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTCGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTACTTTCTCAGGCCAAACTCCCCACAACGGAGATTGCAGCAACTATAAATGAATTCAGATCTCGACATCTGGCTGAGCTCACAGAGCTGTGTGAAGCGAGTGGAAGTTCTCTTGGTTATGGATTTAATAAAGTTATGAGCAAATCAAAATCTCAATCCACAGATTCATTGGATGAGACCCCAGTTTCTGAAGGCACACTGGCAATGTGA 3612 0.4372 MAYSLPQSRMLHGDVGTSYRRGSVGQLGCFDFRGRGIGCGVFGNSRSVSKFRVSGMRVSACWSNSRVVTGRELKVLNIKRSLSCKNSNLIMGSRAIWSKCQGNDSLAYVNGNSRNVDCVEGSGEDAGLGPVSSAELDAPLEEEEVQAGRKEEGGEIGLEEHSVDELKELLQKALKELEVAQINSTMFEEKVKKISETAIFLHDAAVISWNDVNAALDTIQEIANEELMAKEAVQNATMALSLAEARLQVAIESLGPAKEVPDSSQGFNESNGDKNTEEVEKAILFAQEDIKECQANLANCEAELRRLQNRKEELQKEVSKLQEIAETAQLNAVKAEEDVTNIMLLAEQAVAFELEATKRVNDAEIALQRAEKSNSNSNADTIETTQAQDGVAILEEEKSIHCFSSDGTVERDKDLAIDDESLVAKLSPETLSDKASQILEDKTQSDYLSDNENAVQTKKQETQKDLARDSSPFAPKALLKKSSRFFSASFFSFTEDGTEFTPASVFQGLILSVQKQLPKLIFGLLLMGAGVTFFANRVERNAQLLPQADVIMTSVEEVSSSARPLVRHLQKLPKKIKKIIASLPQQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAVAEFGVVFLLFNIGLEVGMPLSVERLSSMKKYVFGLGSAQVLATAVAIGLVVHFICGQPGPAAIVVGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGMAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVIAVTLGLLICGKTILVSLMGRMFGISLISAIRAGLLLAPGGEFAFVAFGEAVNQGIMSAQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRGLGLPVYFGDAGSREVLHKIGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLSQAKLPTTEIAATINEFRSRHLAELTELCEASGSSLGYGFNKVMSKSKSQSTDSLDETPVSEGTLAM 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01037 1203 FunFam K(+) efflux antiporter 2 chloroplastic 1003 1167 - -
Spst1g01037 1203 Coils Coil 353 380 - -
Spst1g01037 1203 Coils Coil 163 183 - -
Spst1g01037 1203 MobiDBLite consensus disorder prediction 1184 1203 - -
Spst1g01037 1203 Pfam Sodium/hydrogen exchanger family 601 975 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst1g01037 1203 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 602 886 IPR004771 GO:0006812|GO:0008324|GO:0016020
Spst1g01037 1203 Pfam TrkA-N domain 1008 1121 IPR003148 GO:0006813
Spst1g01037 1203 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1004 1145 IPR036291 -
Spst1g01037 1203 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 198 1192 - -
Spst1g01037 1203 Gene3D - 1003 1167 - -
Spst1g01037 1203 Coils Coil 276 338 - -
Spst1g01037 1203 Gene3D - 591 983 IPR038770 -
Spst1g01037 1203 FunFam K(+) efflux antiporter 2 chloroplastic 591 981 - -
Spst1g01037 1203 ProSiteProfiles RCK N-terminal domain profile. 1007 1129 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01037 Spst-Chr1 12760478 12774010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01037 82 1203 Inorganic Solute Cotransporters AT4G00630 68.914 0.0 1391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01037 K03455 - gmx:100798822 1942.16