Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00999 ATGAATATGATGCGAAGGTTGAAAAGCATTGCTTCTGGGAGAACTTCCATTTCATCAGATCCTGTAGGTGATTGGACCACAAAAAGACCCAAGTTTGATCAAGACACAGAAGGAACGGTCAATGAGGAGACATATCCTAATGAGAAAGGCGAAAAAGATCTGGAGCAGTATGGAGATGCATCCACAGAAAGTGTTGATTCCAATGCTCCTACAGCTAGAGCTGAGAAGTCAGGTTTGGATCAACTTCCAGAGGAATTAAATGAAATGAAAATTGGAGATGACAAAGGAAAAAACAACAATGAGAAGGATATGGAAGCAACTATCGTAAATGGTAATGGAACAGAAACAGGTCAACTAATTACAACTGCTATTGGTGGTCGAGATGGACAACCTAAGCGGACAATCTCATACATGGCAGAACGTGTGGTCGGCACTGGTTCTTTTGGTGTTGTTTATCAGGCCAAGTGCATTGAAACTGGTGAATCAGTTGCAATAAAAAAAGTGTTGCAAGACAAGAGATATAAGAATAGGGAACTGCAGGTTATGCGCATACTTGACCATACAAACGTTCTCAGACTAAAGCATTGTTTCTATTCAGCAGCCGATAAAGATGAGTTGTACCTTAACCTAGTTTTGGAGTATGTGCCTGAAACTGTCTACAGAGTTTCCAAGCACTATATCAGAATGCACCAACATATGCCTATCATTTATGTGCAACTGTATACCTACCAGATATGCCGGGGTTTAAATTATTTGCATCATGTGATTGGAGTCTGTCATCGGGACGTCAAACCCCAGAATCTATTGGTTAATCCCCAGAGTCATCACTTAAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGCGAACCCAACATATCATACATATGCTCGCGGTATTACAGAGCTCCAGAGCTTATATTTGGTGCAACAGAATACACAACTGCTATTGACATTTGGTCTGCTGGTTGTGTTATGGCTGAGCTTCTTCTAGGACATCCAATGTTTCCTGGAGAGAGTGGGGTTGATCAGCTGGTAGAGATCATTAAGATCTTGGGAACACCAACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACTGAATTTAAGTTTCCTCAGATAAAAGCACACCCGTGGCATAAGGTTTTCCACAAGAAGATGCCGTCAGAAGCAGTGGATCTAGTGTCAAGGATGCTTCAGTATTCACCAAATCTACGTTGCAATGCTTTGGAGGCCTGTGCACACCCTTTCTTCGACGATCTGCGAGACCCCAATGCATGCTTGCCTAATGGGAGACCACTGCCTCCGTTGTTCGATTTCACTGTTCAAGAACTGGCAGGCTCATCAGAAGAGTTGCGTCGACGACTCATTCCCGAGCATGCAAGAAGTCTCTGCTGTCCATCCTGCACCATCATGATTATTCAGCTCATAGTCAAGGAGAGCCTTAAAACCATGCAACCTCATTGTGAAGGAGTGGCAGGTGATGATCCCATGAACGAAGGGCTGCCCGTGGACTATGTGGAATTATCAGATGAGTAG 1548 0.4328 MNMMRRLKSIASGRTSISSDPVGDWTTKRPKFDQDTEGTVNEETYPNEKGEKDLEQYGDASTESVDSNAPTARAEKSGLDQLPEELNEMKIGDDKGKNNNEKDMEATIVNGNGTETGQLITTAIGGRDGQPKRTISYMAERVVGTGSFGVVYQAKCIETGESVAIKKVLQDKRYKNRELQVMRILDHTNVLRLKHCFYSAADKDELYLNLVLEYVPETVYRVSKHYIRMHQHMPIIYVQLYTYQICRGLNYLHHVIGVCHRDVKPQNLLVNPQSHHLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVMAELLLGHPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKKMPSEAVDLVSRMLQYSPNLRCNALEACAHPFFDDLRDPNACLPNGRPLPPLFDFTVQELAGSSEELRRRLIPEHARSLCCPSCTIMIIQLIVKESLKTMQPHCEGVAGDDPMNEGLPVDYVELSDE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00999 515 MobiDBLite consensus disorder prediction 1 78 - -
Spst1g00999 515 Gene3D Transferase(Phosphotransferase) domain 1 217 465 - -
Spst1g00999 515 FunFam Glycogen synthase kinase-3 beta 121 216 - -
Spst1g00999 515 FunFam Shaggy-related protein kinase kappa 217 465 - -
Spst1g00999 515 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 101 466 - -
Spst1g00999 515 ProSitePatterns Protein kinases ATP-binding region signature. 143 167 IPR017441 GO:0005524
Spst1g00999 515 Gene3D Phosphorylase Kinase; domain 1 122 216 - -
Spst1g00999 515 ProSiteProfiles Protein kinase domain profile. 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00999 515 MobiDBLite consensus disorder prediction 26 59 - -
Spst1g00999 515 CDD STKc_GSK3 132 424 IPR039192 -
Spst1g00999 515 Pfam Protein kinase domain 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00999 515 MobiDBLite consensus disorder prediction 9 23 - -
Spst1g00999 515 SMART serkin_6 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00999 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Spst1g00999 515 SUPERFAMILY Protein kinase-like (PK-like) 136 448 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00999 Spst-Chr1 12228347 12232931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00999 141 456 MAP Kinase Gene Family AT3G59790 34.251 1.19e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Spst1g00999 Pkinase 2.2e-64 CL0016