Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00981 ATGGCGCCACCAATCGCGGCGCACCTCACGGTTTTCGCCTTCCTCGTCACTGCTGTCTCTGCCACCACAACCGGATACCACAACCACACCGTCGGCGGTGACGCCGGGTGGTTCTTCAACTCCACCACCAACACAACCGCCACTAACTACACTTCCTGGGCTTCAAATCAAACCTTCGACCTTGGCGATTATCTCATTTTCAATACGAGCTCGAACCAAACGGTGGTTCAGACTTACAACTTGACGACCTATCTGAACTGCACCGCCGACGATACCGACAACGGCACTTTCGTGTACGACGGCGGAAGCAGTAGTTTCAGCCAATCGTTGACCATCGCCGTGCCGTTGACCATAGTTGGACCGAACTACTTCTTCTCCGACGCCGGCGACGGCGTCCAGTGCCAACGCGGCTTGGCCTTTGAGATCGACGTTCAGCGCGGCCTCGGCTTGCCGCCGAGCCTCAACCAGCCGCCGCCGCCGCCGCCGTACCAGGAGCCTCCGGGTCCCGACGTCGCTCAGTCTCCGCCGGTCCCCGTGGCGCAGTCTCCCAGCGGCGGTGCGTTTGCGAGCCGCGCTGACGTGCATTTCCTGGTTTATGGTTTCGCGGCGTTGTTGCTGCTGCAGCAATTTCAGTGA 636 0.6022 MAPPIAAHLTVFAFLVTAVSATTTGYHNHTVGGDAGWFFNSTTNTTATNYTSWASNQTFDLGDYLIFNTSSNQTVVQTYNLTTYLNCTADDTDNGTFVYDGGSSSFSQSLTIAVPLTIVGPNYFFSDAGDGVQCQRGLAFEIDVQRGLGLPPSLNQPPPPPPYQEPPGPDVAQSPPVPVAQSPSGGAFASRADVHFLVYGFAALLLLQQFQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00981 211 PANTHER BLUE COPPER PROTEIN 23 155 IPR039391 GO:0009055
Spst1g00981 211 Gene3D - 26 146 IPR008972 -
Spst1g00981 211 Pfam Plastocyanin-like domain 44 137 IPR003245 GO:0009055
Spst1g00981 211 ProSiteProfiles Phytocyanin domain profile. 27 146 IPR003245 GO:0009055
Spst1g00981 211 MobiDBLite consensus disorder prediction 149 184 - -
Spst1g00981 211 FunFam Early nodulin-like protein 18 26 147 - -
Spst1g00981 211 MobiDBLite consensus disorder prediction 152 176 - -
Spst1g00981 211 SUPERFAMILY Cupredoxins 27 144 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00981 Spst-Chr1 12049079 12049966 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00981 1 153 Phytocyanin Superfamily AT1G08500 38.854 3.37e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00981 - - gmx:100783106 289.271