Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00961 ATGGCGTCGAACCGGAACGGCGTCCAAAGAGGGAGCGCCAAGTTTGATCGCCCTCTCAAGCCCCGCCTTCGCCCCTCCTCCCCCTCGCCTGGATCCGCCCTTCGCCGCCCCACCCCCACTGCAAGAAACACTGACGCCGATCTGAAGTTTGGATATGCTGTATCGTTAGAGCTGGGGGTGAAGATGATAATGAATCGTCCTCCCATTGCTTATCTCCTAATAATGGAGAACAGCTCCTGTTTTGATCTTTTGGAAGAAAAGAGCACTCACTCTGTTCGTGCTTTGGGAGAGGATCAACTGGGTTTGGTGCCTGGAAGAGTTAGAGTGGCTGTTAGATTGAGACCACGAAATGCCGAAGAAATGATGGCGGATGCAGATTTTGCTGACTGTGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCGTAGAAACAACTGGGATTCAGACACGTATGAGTTTGATGAGGTGCTTACTGAATTTGCATCACAGAAACGTGTCTATGAAGTTGTGGCTAAACCAGTTGTGGAGAGTGTTCTTGATGGTTATAATGGAACTGTCATGGCTTATGGTCAAACTGGAACTGGGAAAACTTTTACACTTGGACGACTGGGGGAAGTAGATGCTTCTGATCGTGGTATCATGGTCCGTTCCATGGAGGATATTTTTGCTGATTTGTCACCCAATACTGATTCTGTCACAGTCTCGTATCTCCAGCTTTATATGGAGACTCTACAGGACTTGCTTAATCCAGCAAATGATAACATTCCTATAGTGGAAGATCCAAGAAGTGGGGATGTATCTATGCCTGGGGCAACTCTTGTAGAAATCACAGATCAACATAGTTTTTTGGAGTTGTTAAGAGTAGGGGAAGCAAATCGAATTGCTGCTAACACAAAATTGAACACTGAGTCATCTCGCAGTCATGCTATTCTGATGGTTCATATTAAGAGGTCTGTCTTGGAAAGTGAAGATATTGTTTCTAGTCAAAATGGCGACGTCTCTCATTTGACTAAACCATCAAAGCCACTTGTTCGGAAGAGCAAGTTGGTTGTGGTAGACTTGGCAGGTTCAGAACGGGTCCATAAGTCAGGGAGTGAAGGGCACATGCTAGAGGAAGCTAAATCTATCAATCTTTCACTTAGTTCACTGGGAAAATGTATTAATGCTCTAGCAGAGAACAATGCTCATGTTCCATTTCGTGATTCGAAGCTTACAAGGATGCTTCGAGATTCTTTTGGTGGAACAGCTAGGACTTCATTGATTGTGACTATTGGCCCATCACCACGTCATCGAGGAGAGACTTCTAGTACCATATTGTTTGGCCAAAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAATTTGATTATAAAAGCTTGTCTCGCAAGCTTGAGGTTCAGTTAGATAAGCTTATTGCAGAAAATGAAAGGCAGCAGAAAGCTTTTGAGGATGAAGTTGAGAAAGTAAATTTGGAGGCACAATGTCGAATTGCTGAGGTTGAGAGGAACTTTGCAGATGCGTTGGAGAAAGAGAGACTGAAATGTCAGATGGAGTACATGGAATTGGTAAAGGAGCTGGAGCAGAAGTTGGTGTTGAATCAAGAAAGACTTGACTGCAATAGTTCTGTGGCTGAGAATGGAGAGGGGCCTGCATTATCTTCTGTAGGTGAAGTTACTGAGGTCAAACTGCTGCTTGAAACCGAAAGAAATCGGAGGAAGGCAGCTGAAGAAGAGGTGGAACATCTAAAAAATCAGTTGGGAAAACACACACAAGAGCAGGCAGGAGATGCAGAGAATATAAAGCTTCGCAACATCCTGGAAGACGAGGCTAATCAGAAAAAAAGACTTGAAGAAGAAATAATAATACTAAGGAGTCAATTATTGCAATTGAACTTTGAAGCTGACCAGATGAGAAGATGTCTGGATAATGGAAGCTCTGGGAGCACATTTTCTGCCATGGATTCCTCCAGGCATTCCCAATACAAGGACACTGCGAATGGTCAGAAGTCATCTGTTGCTACACTCTTTGAGCAAGTTGGATTGCAAAAGATTTTGTCATTGCTGGAGTCAGATGATGCCAATGTACGAATTCATGCTGTGAAAGTGGTGGCCAACCTAGCAGCCGAAGAGGCTAATCAGAAGAGAATTGTTGAAGCTGGGGGTCTTACTTCCTTGCTGATGCTTCTTCGAAGATATGAGGATGAAACTGTTCGCAGAGTAGCTGCTGGGGCAATTGCCAATCTTGCTATGAATGAAGCAAATCAAGAACTTATTATGGCTGAAGGAGGAATTACTCTGTTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTTCGAATGGTTGCTGGGGCAATTGCTAACCTATGTGGCAATGATAGAATATTGTTGACTCTGAGATCCCAGGGAGGTATAAAGGCTTTACTGGGAATCGTAAGATGTGGGCATCCTGATGTTCTTTCCCAAGTTGCACGAGGAATTGCAAACTTTGCAAAATGCGAGTCTCGAGCTTCTAACCAAGGGATAAAAAGTGGGAGATCTTTTTTGATAGAGGATGGTGCACTCCCGTGGATAGTACAAAATGCTAATAATGAAGCTGCACCAATCAGGCGTCACATAGAGCTTGCACTCTGCCACTTGGCACAGCATGAAGTGAATGCAAAGGACCTGATTAGTGGAGGTGCTCTTTGGGAACTTGTCCGGATTTCACGAGATTGTTCACGAGAGGATATACGGAATCTTGCTCGTCGGACTCTCAGTTCTAAATGTGATTCTCGAAAAGTACATAATATGAATTGTTCATTCTGGAATGTATCAAACGGAAACCTTTCACGCAAGACCTTCCACGACAGAAAACATAATGTTTCTGAAAAGGAAAATAATGGGGGTGCAGATGCTGCTCTGATATAA 2922 0.437 MASNRNGVQRGSAKFDRPLKPRLRPSSPSPGSALRRPTPTARNTDADLKFGYAVSLELGVKMIMNRPPIAYLLIMENSSCFDLLEEKSTHSVRALGEDQLGLVPGRVRVAVRLRPRNAEEMMADADFADCVELQPELKRLKLRRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGEVDASDRGIMVRSMEDIFADLSPNTDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPRSGDVSMPGATLVEITDQHSFLELLRVGEANRIAANTKLNTESSRSHAILMVHIKRSVLESEDIVSSQNGDVSHLTKPSKPLVRKSKLVVVDLAGSERVHKSGSEGHMLEEAKSINLSLSSLGKCINALAENNAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAFEDEVEKVNLEAQCRIAEVERNFADALEKERLKCQMEYMELVKELEQKLVLNQERLDCNSSVAENGEGPALSSVGEVTEVKLLLETERNRRKAAEEEVEHLKNQLGKHTQEQAGDAENIKLRNILEDEANQKKRLEEEIIILRSQLLQLNFEADQMRRCLDNGSSGSTFSAMDSSRHSQYKDTANGQKSSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDRILLTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIKSGRSFLIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVNAKDLISGGALWELVRISRDCSREDIRNLARRTLSSKCDSRKVHNMNCSFWNVSNGNLSRKTFHDRKHNVSEKENNGGADAALI 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00961 973 MobiDBLite consensus disorder prediction 1 42 - -
Spst1g00961 973 FunFam Kinesin-like protein 98 478 - -
Spst1g00961 973 ProSiteProfiles Kinesin motor domain profile. 106 448 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g00961 973 PANTHER CENTROMERE PROTEIN E 106 658 IPR027640 GO:0003777|GO:0007018
Spst1g00961 973 CDD KISc 106 446 - -
Spst1g00961 973 Pfam Armadillo/beta-catenin-like repeat 715 752 IPR000225 GO:0005515
Spst1g00961 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 483 IPR027417 -
Spst1g00961 973 PRINTS Kinesin heavy chain signature 182 203 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g00961 973 PRINTS Kinesin heavy chain signature 398 419 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g00961 973 PRINTS Kinesin heavy chain signature 349 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g00961 973 Gene3D Kinesin motor domain 103 478 IPR036961 -
Spst1g00961 973 ProSitePatterns Kinesin motor domain signature. 348 359 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst1g00961 973 SMART kinesin_4 104 456 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g00961 973 Pfam Kinesin motor domain 112 448 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g00961 973 Coils Coil 464 528 - -
Spst1g00961 973 Coils Coil 561 595 - -
Spst1g00961 973 Gene3D - 653 945 IPR011989 -
Spst1g00961 973 SMART arm_5 796 836 IPR000225 GO:0005515
Spst1g00961 973 SMART arm_5 712 753 IPR000225 GO:0005515
Spst1g00961 973 SMART arm_5 754 795 IPR000225 GO:0005515
Spst1g00961 973 SMART arm_5 672 711 IPR000225 GO:0005515
Spst1g00961 973 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 723 766 IPR000225 GO:0005515
Spst1g00961 973 FunFam Kinesin-like protein 653 928 - -
Spst1g00961 973 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 682 724 IPR000225 GO:0005515
Spst1g00961 973 Coils Coil 602 636 - -
Spst1g00961 973 SUPERFAMILY ARM repeat 675 929 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00961 Spst-Chr1 11819974 11837976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00961 105 495 Calmodulin-binding Proteins AT5G65930 34.069 1.74e-46 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00961 - K10396 pvu:PHAVU_008G075500g 1523.06