Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g00944 | ATGGGAAATTGCGGAACCAGAGAGGAATCTGCCGTAGTTTCCAACGCCCAAGTTCAGCAGCTTCACCATGCGACGTCGTTGGGCGCGAGTGCAAGGAGCCAGAATGCCGGTAGCGAGAAGAAGCAAGGTCATGGTCACGGTCACAGGCACAATCTGAGCGAGTGCGCTTCGGATCTGAGCGAAGCGTGTTCGACACCGCGCGGTAACAATAGCAACAACACGCACGTGATATCCTTCACGCTCTACGAGTTGGAGACCATAACAAAGAGCTTTCGCGGAGACTACATCCTCGGCGAGGGAGGGTTCGGCACCGTTTACAAAGGTTACATTGATGAGAACGTCAGAGTGGGACTCAAATCGCTTCCTGTAGCGGTTAAGGTTCTGAACAAGGAAGGATTACAAGGACATCGAGAGTGGCTTACGGAGGTGAATTTTCTTGGGCAGCTAAGGCATCCTAATCTAGTGAAGTTGATTGGGTACTGCTGTGAAGATGACCATAGGCTCCTTGTGTACGAGTTCATGTTCCGAGGGAGTTTGGAAAATCACTTATTCCGAAAGGCAACTGTCCCTTTATCATGGGCTACAAGAATGATGATTGCTCTTGGAGCTGCCAAAGGACTTGCATTTCTCCACAATGCTGAAAGGCCAGTGATCTACCGTGACTTCAAAACGTCTAATATATTATTGGACTCCGATTATACAGCAAAGCTTTCTGATTTTGGACTAGCTAAAGCAGGACCACAAGGTGATGAAACCCATGTATCCACTCGAGTCATGGGTACATATGGTTATGCTGCCCCTGAATATGTAATGACTGGCCACCTGACGGCTAGAAGTGACGTCTATAGCTTTGGCGTTGTTCTTTTGGAGCTCTTAACAGGAAGGAAATCCGTCGACAAGACCAGACCTGGCAAGGAACAGAGCTTGGTAGATTGGGCAAGGCCAAAGCTAAATGACAAGAGAAAGCTGCTACAAATAATTGATCCCAGATTGGAGAATCAATACTCAGTTAGGGCTGCACAAAAAGCATGTAGCTTGGCTTATTACTGTTTAAGTCAAAATCCCAAAGCGAGGCCCCTAATGAGCGATGTAGTTGAGACATTGGAACCCTTACAAAGTTCCAGTATTGGTGCAGGTGAAGTCTCATTATTATCTGGTTCAAATAATGGGAGTGCTGGGGCTTTCGCCATGAACAAAATCTCTGATTACCGTATGCGTCAAAGGTTTTCAAACAACGTTGGTCCTGGTGCTACTTGTCGATCTCCGAACCCAAATTGTTCACCAGGTGCCCCAGCAGCACTACGGGTGAGATGA | 1314 | 0.4756 | MGNCGTREESAVVSNAQVQQLHHATSLGASARSQNAGSEKKQGHGHGHRHNLSECASDLSEACSTPRGNNSNNTHVISFTLYELETITKSFRGDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSIGAGEVSLLSGSNNGSAGAFAMNKISDYRMRQRFSNNVGPGATCRSPNPNCSPGAPAALRVR | 437 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g00944 | 437 | SUPERFAMILY | Protein kinase-like (PK-like) | 71 | 369 | IPR011009 | - | |
Spst1g00944 | 437 | FunFam | Probable serine/threonine-protein kinase PBL8 | 174 | 384 | - | - | |
Spst1g00944 | 437 | ProSitePatterns | Protein kinases ATP-binding region signature. | 97 | 126 | IPR017441 | GO:0005524 | |
Spst1g00944 | 437 | Gene3D | Phosphorylase Kinase; domain 1 | 55 | 173 | - | - | |
Spst1g00944 | 437 | FunFam | Serine/threonine-protein kinase BIK1 | 58 | 173 | - | - | |
Spst1g00944 | 437 | ProSiteProfiles | Protein kinase domain profile. | 91 | 372 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g00944 | 437 | CDD | STKc_IRAK | 97 | 371 | - | - | |
Spst1g00944 | 437 | MobiDBLite | consensus disorder prediction | 414 | 437 | - | - | |
Spst1g00944 | 437 | MobiDBLite | consensus disorder prediction | 27 | 52 | - | - | |
Spst1g00944 | 437 | Pfam | Protein tyrosine and serine/threonine kinase | 96 | 368 | IPR001245 | GO:0004672|GO:0006468 | |
Spst1g00944 | 437 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 217 | 229 | IPR008271 | GO:0004672|GO:0006468 | |
Spst1g00944 | 437 | Gene3D | Transferase(Phosphotransferase) domain 1 | 174 | 380 | - | - | |
Spst1g00944 | 437 | PANTHER | OS01G0588500 PROTEIN-RELATED | 45 | 372 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g00944 | Spst-Chr1 | 11662191 | 11665458 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g00944 | 71 | 381 | Glycoside Hydrolase | AT3G07070 | 52.866 | 2.01e-109 | 327 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Spst1g00944 | PK_Tyr_Ser-Thr | 6e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g00944 | - | - | gmx:102662348 | 838.95 |