Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00938 ATGGTGTCGCGCAAGAAGTTCACGAAGCTGCTTGTGGAACCGGAGACATTCTTAACGTTGAAAATAAAATATTCTGGAGACGTGGCCAAGGTGGAGAAGAAAGGCACGTTGGAATACCGAAGCATGCATTCAGCGTACCACATCACAGCCTCTATGGACTGGGAACATTCTGGGTCTGTTGATAACTTAAAGGTTGCATTCCCCACGCATTCATTGCACAGGCGTAAGGGAAGAGAGGAGGGTTATCAGGTTTTGGTAGGTGCTGGTCGAAGATGTCATGAATGCACTGCAGTTTTGGTGCTCAAAAAAAACCTTGTCCTCTCTCTGTGCTTTAGTGGTTGGGAAGCTGAAGAAGGTAATCACAAAGATACAAAGAAAGATAAGAAAGATGAGGTTATTGGAAGGCATGGTTCTGTTCATGTGCAACGATGGATGGCATGGTTTGATCTTCAGTGTCCAGATTTTCTTCTTTGTCGCAATGGAAACTTAAAAACTCTGAGGGATTGGGCTTATGATCGTGCTGCGATCAAGTTCCGCGGGGTTGATGCGGACATCAATTTTAACGTTAGTGACTACTATGAAGATATAAAGCAAGTTATGAGTAATTTCATGAAGGACGAGTTTGTGCATATTCTGCGTCGACAAAGCACTGGTTTTTCAAGGGGAAGCTCCAAATACAGGGGAGTTACTCTGCATAATATTGTTGTTTCTGCTGCTGAATTCGAGGGTACAAGTTCTTTTGTGAAGGATACCCTATATAACTTAAAGGAGAAACTCGAAGCATGGACATCGTTACTGAGAAACTCTTCTCATGTCGACGTTGAGGCACATCCTAGGCAGCTGCATAATTGGGTTGGGGGTCCTCCTAATCTCTATGATATAAGTGGAAGTGCACACTTCATAAATAAGTGTGACAATGGAATTGTTATTCACCGAAATCGGGATCCTGAAGCTGGGCCTATGGACCAAGTACAGGTATGTGTTCGAAAGAGTTTCATTATACTGGAGTACATGATCGGGGATTATGATGAAACTTATCGTAATCTCTTCACTCTTAGTGTGAATATAATGGATAGAGTTGGCTCTCTTGCAAAAGATTTTATCCTCATAAACCCTTCAGACTGTGCTACTCCAGTGAAGCACTCTAAACTAGAAAAGTTGAGGCAAGATGACAAGTGGGAAAATGATTTCTTTAGCGATGGTGAACCACTGATCACTAATCGCAAAGTTAGAGCTCAAGATCTACACCTCAAGCTTCAAAGGAAAGGTCTTCAATCTGCATCTCGGAGCGGAAAGAGTTATGCTCCAAACATGCGTGTTCTCAGTGAAAGGCTAACGGGAACAATGACGAGTACAACCTACAAATGTCGATCCGCCAAAATCAAAAGTTGTTAA 1395 0.4265 MVSRKKFTKLLVEPETFLTLKIKYSGDVAKVEKKGTLEYRSMHSAYHITASMDWEHSGSVDNLKVAFPTHSLHRRKGREEGYQVLVGAGRRCHECTAVLVLKKNLVLSLCFSGWEAEEGNHKDTKKDKKDEVIGRHGSVHVQRWMAWFDLQCPDFLLCRNGNLKTLRDWAYDRAAIKFRGVDADINFNVSDYYEDIKQVMSNFMKDEFVHILRRQSTGFSRGSSKYRGVTLHNIVVSAAEFEGTSSFVKDTLYNLKEKLEAWTSLLRNSSHVDVEAHPRQLHNWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPMDQVQVCVRKSFIILEYMIGDYDETYRNLFTLSVNIMDRVGSLAKDFILINPSDCATPVKHSKLEKLRQDDKWENDFFSDGEPLITNRKVRAQDLHLKLQRKGLQSASRSGKSYAPNMRVLSERLTGTMTSTTYKCRSAKIKSC 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00938 464 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 170 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00938 Spst-Chr1 11573822 11578837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00938 176 232 AP2-EREBP Transcription Factor Family AT2G28550 82.456 5.12e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00938 K17680 - zju:107418329 125.946