Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00916 ATGCTAACCCTCAATCTCAGCGCAATTTCTTCTTCGTTCTCAGTTGTTCCATATGCCAATTATCCACTGTCTATTCAAACTCAATTGTTATTTCGTTCCAATCTTAATTACTCCTTTGCTACAACAGCAACCAGAAAGTTCAAGTCTTTTCAGCTCAAGGCTGGATTTTGGGAATCAATTAAATCAGGATTAATGAAGAATAACTCAATGCAAGTCATTGATCCACCTCTAGATGAAGAAGATGAAGAACCTCTGCCTCAAGAGTTTGTCCTTGTGGAAAAGACCGAACCTGATGGAACAATTGAGCAAATAATATTCTCTTCAGGTGGAGATATTGATGTTTATGATCTTCAAGCCCTTTGTGACAAGGTAGGGTGGCCACGTAGGCCACTGTCAAAATTAGCTGCGGCTTTGAAAAATAGCTATATAGTGGCCTCACTTCATTCTATAAGAAAGTCACCTGGGTCAGAGGGGAATGAACAGAAGAGATTAATTGGCATGGCCCGTGCCACGTCTGACCATGCCTTCAATGCCACAATTTGGGATGTCCTAGTTGATCCTAGTTACCAGGGCCAAGGCCTTGGTAAAGCTCTTATAGAGAAACTGATTAGAGCTCTTCTGCAAAGGGACATTGGTAATATAACTCTGTTTGCAGATAGTCAAGTTGTGGAATTTTATCGGAATTTAGGCTTTGAAGCTGACCCAGAGGGCATAAAAGGCATGTTTTGGTACCCGAATCACTAA 744 0.4126 MLTLNLSAISSSFSVVPYANYPLSIQTQLLFRSNLNYSFATTATRKFKSFQLKAGFWESIKSGLMKNNSMQVIDPPLDEEDEEPLPQEFVLVEKTEPDGTIEQIIFSSGGDIDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSIRKSPGSEGNEQKRLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALIEKLIRALLQRDIGNITLFADSQVVEFYRNLGFEADPEGIKGMFWYPNH 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00916 247 Gene3D - 108 244 - -
Spst1g00916 247 PANTHER ACYL-COA N-ACYLTRANSFERASE 32 244 IPR045039 GO:0008080
Spst1g00916 247 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 104 247 IPR000182 GO:0016747
Spst1g00916 247 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 113 236 IPR016181 -
Spst1g00916 247 FunFam Putative acetyltransferase NSI 108 244 - -
Spst1g00916 247 CDD NAT_SF 160 216 - -
Spst1g00916 247 Pfam Acetyltransferase (GNAT) family 114 231 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00916 Spst-Chr1 11402054 11405258 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst1g00916 Acetyltransf_1 1e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00916 K22450 - gmx:100799333 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00916 1 11402054 11405258 Spst1g00916 1 11402054 11405258 ECH