Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00915 ATGAAACCTATCGCTTACAGTGCTTCGGGATATGCCTTGGCTGTTTTGTGTTGTTTTCTCATCCTCACACAAGCTTCACAAACAGACCCTTCAGAAGTAAATGCACTCATTTGCATCAAAAAAAGTTTGATTGATCCTAAGAACAATCTGAGAAACTGGAATTCGGGTGACCCGTGTTTGGCAAACTGGACTGGAGTTTCTTGTTCTGTTAGGGAGGAGGCTGGTTACTTCCATCTATTTAATGACTATGAATCTCTCGGGAAGTTTAGCAACCCAGATTGGTCTTTCATGTGGAACAATTTGACTGGCACAATACCGAAGGAAATAGGAAATATCTTGTCATTGGAACTCTTGCTCCTAAGTGGGAATAAGTTATCTGGTAGTTTACCAGATGAGCTAGGCAACCTTTCTAATTTGGATAGACTGCAAGTTGATGAAAACCAATTGTCAGGTCAGATTCCAGAGTCATTTGCCAATATGGTCAAAGTTAAACATCTCCACATGAATAACAACACCTTCTTTGGTCAACTTCCATCCAAACTTTCAAAGCTGTCTAATCTTGTGCATTTGCTTGTGGACAACAATAACTTATCTGGTTACCTTCCATCAGATTTCTCTGTGTTACAACGGTTAAGGATACTCATGCAATTCTGCAATTCATTGGCTTCTTACTTCAAAAGCCAACTTGATAACAATAATTTCAGTGGGACTGAAATTCCTTCTAGCTATGAAAACTTCTCCGGTCTAGTGAAACTAGACCTTAGCTGGAATCAGTTTACTGGAACTATACCATCAAAGAAGCTTGCAAACAATATGACCACTATCTCACTTGAGAACAATTTGCTGGATGGATCAATCCCTGCTAGCATATGGCAGGACATGGCCTTCAATACTAAAGATAAACTTAAAATTAATCTCCAAAACAATTCGCTATCGAACATTTTGGGAAATCTAAACCCCCCGGCAAATGTTACCTTGAGGCTTTCTGGCAATCCAATCTGTGAGAATTCTAACATAGAAGGTATTGATCTATATTGTGGACCCGGTGGAGATAACAATGAAGATGAAGTAGTCCAAAACCCTCAAAATCCAACAACTGTCTGTCCACTACAAGATTGCCAATTATCAATATATGCTTATGAAGATAGAAACCGTATCACCATGTATTTAAAACTATTCCCTCCGTATGATTCCCACTTAAGTACATTCAATGAGAGTGAGGTCTATCGCATTAAAACCATATTTACTTCATGGCGATTTCCTCCCAATCATTTCTTTGGACCATATGAACTCCTGAACTTCACTCTTGTTGGACCTTATGCAGCTACTATAGATTCAAAGAGGGGTCAATCTAACACAGTCATATTGGTTGCTGCTTTAACATCAGCTGTTGCTAGTATTTTAGCAACATCTGCTATAATCATGTTCCTGCTTTTTACAAGACAGAGAAAATATCAGCAGATGATTTCAAGGAAACTTAAGGAATTGGCTCTTGCTACGAACAATTTTAGCAGCTCAACTATAGTTGGCCACGGAGGTTATGGGAACGTCTATAAAGGCATTTTATCTGGTGAAACACTTGTGGCCATTAAACGAGCAGCAGAAGGTTCCTTACAAGGCCAAAAGGAGTTTTTGACTGAGATTGAACTTTTATCAAGGTTACACCATCGGAATCTTGTCTCACTGATTGGATACTGTAATGAAGAAGAGGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGACTGGATTTCTGGTAAAGGTGAAACAGCCAAGGAAAGACAAAATTTTGGTATGGGCTTGAAAATTGCTTTGGGTGCAGCCAAAGGCATACTATATCTTCATACAGAGGCTAACCCTCCTATATTCCACCGAGATATTAAAGCCAGCAACATACTTCTGGACTCCAAATTTACAGCTAAAGTGGCTGATTTTGGACTGTCACTGCTTGCATCAGAAGAATCTAGCACTAAATACATGTCAACAGTTGTGAAGGGAACGCCAGGTTACCTTGATCCAGAATATGTGTTGACTCATAAGTTTACTGACAAAAGTGATATCTATAGCCTAGGAATTGTGTTTCTGGAGCTTTTGACAGGCAGGCAACCAATCTTACGTGGGAAACACATTGTTAACGAGGTTAATGTGGCTTGTCGATCTGGCATGATATATTCTGTTATAGAGAGCAGAATGGGGTTATATCCATCAGATTGCTTGGACAAGTTTTTGACTCTGGCCCTCAAATGCTGCCAAGAAAATCCAGAGGAGAGGCCATCAGCGCTAGATGTGGTGAGGGAATTAGAAGATATTGCTGCAATGCTATCAGAAACTGAAGCTGGTTTCCCAGATATTACCTTAGATAACTCAGGTGAAATGGCACCATCATCATCTTTAGGATCTAATGCAGCAAGGGAGGATCAACACAAGTTCACGTATGTGGCAGGAAGTAATCTTGTCAGTGGTGTCGTTCCCACCATTGTTCCTCGCTAA 2502 0.4021 MKPIAYSASGYALAVLCCFLILTQASQTDPSEVNALICIKKSLIDPKNNLRNWNSGDPCLANWTGVSCSVREEAGYFHLFNDYESLGKFSNPDWSFMWNNLTGTIPKEIGNILSLELLLLSGNKLSGSLPDELGNLSNLDRLQVDENQLSGQIPESFANMVKVKHLHMNNNTFFGQLPSKLSKLSNLVHLLVDNNNLSGYLPSDFSVLQRLRILMQFCNSLASYFKSQLDNNNFSGTEIPSSYENFSGLVKLDLSWNQFTGTIPSKKLANNMTTISLENNLLDGSIPASIWQDMAFNTKDKLKINLQNNSLSNILGNLNPPANVTLRLSGNPICENSNIEGIDLYCGPGGDNNEDEVVQNPQNPTTVCPLQDCQLSIYAYEDRNRITMYLKLFPPYDSHLSTFNESEVYRIKTIFTSWRFPPNHFFGPYELLNFTLVGPYAATIDSKRGQSNTVILVAALTSAVASILATSAIIMFLLFTRQRKYQQMISRKLKELALATNNFSSSTIVGHGGYGNVYKGILSGETLVAIKRAAEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEEEEQMLVYEFMPNGTLRDWISGKGETAKERQNFGMGLKIALGAAKGILYLHTEANPPIFHRDIKASNILLDSKFTAKVADFGLSLLASEESSTKYMSTVVKGTPGYLDPEYVLTHKFTDKSDIYSLGIVFLELLTGRQPILRGKHIVNEVNVACRSGMIYSVIESRMGLYPSDCLDKFLTLALKCCQENPEERPSALDVVRELEDIAAMLSETEAGFPDITLDNSGEMAPSSSLGSNAAREDQHKFTYVAGSNLVSGVVPTIVPR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00915 833 SUPERFAMILY L domain-like 27 336 - -
Spst1g00915 833 PANTHER RECEPTOR-LIKE PROTEIN 55 39 775 - -
Spst1g00915 833 CDD STKc_IRAK 509 774 - -
Spst1g00915 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Spst1g00915 833 SMART serkin_6 503 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00915 833 Gene3D Ribonuclease Inhibitor 217 305 IPR032675 -
Spst1g00915 833 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Spst1g00915 833 Pfam Protein kinase domain 505 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00915 833 SUPERFAMILY Protein kinase-like (PK-like) 489 776 IPR011009 -
Spst1g00915 833 Gene3D Transferase(Phosphotransferase) domain 1 579 785 - -
Spst1g00915 833 Gene3D Phosphorylase Kinase; domain 1 471 578 - -
Spst1g00915 833 FunFam receptor-like protein kinase FERONIA 473 578 - -
Spst1g00915 833 FunFam Leucine-rich repeat receptor-like kinase 31 165 - -
Spst1g00915 833 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Spst1g00915 833 Gene3D Ribonuclease Inhibitor 29 216 IPR032675 -
Spst1g00915 833 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 579 785 - -
Spst1g00915 833 ProSiteProfiles Protein kinase domain profile. 503 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00915 Spst-Chr1 11382785 11400471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00915 13 774 Receptor kinase-like Gene Family AT5G01950 48.791 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Spst1g00915 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00915 - - gmx:100815005 1002.66