Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00900 ATGGCAGTTTTTGTGGCACTTTCTCACTCCATTTTCCTCTTCCACCGTCTTCTCTGTACTCCTTCCAGCTGCAAGCAACTGCCGAATCCAATCAAGCCCTTAAAACTCGGGATTGTCCCGCTTTCACTCTCCGAGTTGCTTTTCAGCTCCTCTTCCCATGGCATGAGAAAACATAGCGGGGCTCTTGGTTTGAAGTTTTGTGTGATGATGTGGAGCATGTATCGGGGCTTTGTTTGTGTTCCATTGTTTGTGTGCTTGGTATTGGCTATTGAACTTGTTGTAGCAAAGGATTTTGAGCCTACAGATAATATCTTACTCGATTGTGGGGGTCCTCCATCGAGTACTGATACTGATGGCCGTGTATGGACAACTGATGTTGGTTCCAAGTTTGATTCCTCCTCTGCAAAATCCACCTCCGTATCGCCGGCGGCAACTCAAGACCCTGCCGTCCCTCAGGTGCCCTACATGACGGCGCGTGTGTTCCACGCGCCTTTTACATACTCTTTTCCGGTAGCTTCTGGTTGGAAGTTCCTCCGGCTGCACTATTACTCGGCTTCTTACTCCAATCTCAATGCGTCGGATGCGCTGTTTGGGGTGACGGCGAATTCATACACGCTTCTTAGGAACTTCAGTGTTTCTCAGACCACCCTGGCTTTGAATTATGCCTACATTTTGAAGGAATTTGCCATCTATGTAGAAGGGAAAACCTTGAATGTGACTTTCACTCCGTCTAACAATGCATCCAATGCTTACGCTTTTGTTAATGGGATTGAGGTTGTGTCCATGGCTGATATTTATACTGCCACTGATGGAACTACCATGATAGTGGGTACAAATACTGCTTACACTATTGATAACAGCACTGCACTTGAGAATGTTTATAGGTTGAATGTGGGTGGGAATGATATCTCTCCCTCCCATGATACTGGTATGTTTAGGTCATGGTCTGATGATACGCCCTTCCTCTTTGGGGCTTCATTTGGAGTTACTGAGCCTGCCGATCCTGATGTGAAGTTTGAGTATCCTCCGGGCACGCCAAGTTATATTGCTCCACTTGATGTCTACACCACGGCCAGAACAATGGGCCCAAATCCTGAGATCAACACGAATTACAACTTGAGTTGGATCTTCAACATTGATTCTGGGTTTTCCTATCTAGTGAGACTCCATTTTGCTGAGGTATCATCAAATATAACCAAGATTAATCAAAGAGTATTTGATATATTCCTCAATAATCAAACAGCTATGGCTCAGGCTGATGTAATTGCCTGGGCAGGCATATTGGGCCTTTCACATTCTAATGGGGTGCCTGTGCATAAAGATTTTGTTGTCTTTGTTCCCGAGGATAAAGAACCACGGCAGGACCTGTGGCTTGCATTGCACCCAGATCCAACCGACAAGCCCATGTATTATGATGCAATCTTGAATGGAGTGGAGATATTCAAAATTAGTGATAGTACAGGTAATCTGGCAGGGACAAATCCTATTCCTCCTCCTGTGCAAGACAAAATTGACATATCAACAGCTAGAGCACATAATCATGGAAAATCAAAGAATCATACAAGCATAATTGCAGGAGGTGTTGCAGGAGGAGTTGTTGTGTTACTTGTGATTGGGATATTTGCTTTTGCTGCATCCCGTCGTCGTAGGCAAGGAAAGGATTCTGGTGCAAGTGAGGGGCCATCTGGCTGGCTTCCACTTTCTCTTTATGGTAATTCACATTCTGCAGCTTCTGCCAAGACCAACACAACAGGAAGTTATGCTTCCTCTCTCCCATCAAACCTTTGCCGTCATTTCTCATTTGCTGAAATCAAGTCCGCCACAAACAACTTTGATGAGGCTTTGCTTCTTGGTGTGGGAGGATTCGGTAAGGTTTATAAGGGAGAAATTGATGGTGGAACAACCAAAGTAGCAATAAAACGTGGGAATCCACTATCTGACCAGGGGGTGCATGAGTTCCAAACCGAGATTGAAATGCTCTCTAAACTTCGTCACCGCCACCTTGTTTCCCTGATTGGATACTGTGAAGAAAACACTGAAATGATCCTTGTGTATGATTATATGGCCTATGGAACACTCAGGGAGCATTTGTACAAGACCCAGAAACCTCCACTTCCATGGAAGCAAAGGCTGGAGATATGCATCGGAGCTGCTCGAGGTTTACACTATCTACATACTGGTGCTAAACACACAATCATTCACCGTGATGTGAAGACCACAAACATTTTACTCGATGAGAAGTGGGTGGCCAAGGTTTCTGATTTTGGATTGTCAAAAACAGGTCCAACATTGGACAATACCCATGTAAGTACTGTTGTAAAGGGTAGTTTTGGGTACTTGGATCCAGAATACTTCAGGAGGCAGCAACTAACTGACAAATCTGATGTTTACTCATTTGGGGTGGTTCTCTTTGAGATATTGTGTGCTCGTCCAGCTTTGAACCCGGCCCTTGCTAAGGAGCAAGTTAGTCTGGCTGAGTGGGCAGCTCATTGCTACATCAAAGGCATTCTTGACCAAATCATTGATCCCTATCTAAAGGGAAAGATAGCTCCGGAATGCTTCAAGAAGTTCGCTGAGACTGCGATGAAGTGCGTGGCTGACCAGGGAATTGACAGGCCATCCATGGGTGATGTCTTGTGGAACCTTGAATTTGCTTTGCAGCTTCAAGAAAGTGCAGAGGAGAGTGGCAGCGGCTTTGGCGGCATTCACAATGAAGAGGAGCCGCTGTATACAGATTCTAAAGGAAAGAAGGACTCTGATGCACTGCCTTTTGATGGGAATGTGACTGACTCCAGAAGCAGTGGCATTTCAATGAGCATTGGAGGTAGAAGCTTGGCTAGTGAAGACTCTGATGGGTTAACCCCTAGTGCTGTGTTCTCCCAGATCATGAATCCAAAAGGGCGTTAA 2907 0.4541 MAVFVALSHSIFLFHRLLCTPSSCKQLPNPIKPLKLGIVPLSLSELLFSSSSHGMRKHSGALGLKFCVMMWSMYRGFVCVPLFVCLVLAIELVVAKDFEPTDNILLDCGGPPSSTDTDGRVWTTDVGSKFDSSSAKSTSVSPAATQDPAVPQVPYMTARVFHAPFTYSFPVASGWKFLRLHYYSASYSNLNASDALFGVTANSYTLLRNFSVSQTTLALNYAYILKEFAIYVEGKTLNVTFTPSNNASNAYAFVNGIEVVSMADIYTATDGTTMIVGTNTAYTIDNSTALENVYRLNVGGNDISPSHDTGMFRSWSDDTPFLFGASFGVTEPADPDVKFEYPPGTPSYIAPLDVYTTARTMGPNPEINTNYNLSWIFNIDSGFSYLVRLHFAEVSSNITKINQRVFDIFLNNQTAMAQADVIAWAGILGLSHSNGVPVHKDFVVFVPEDKEPRQDLWLALHPDPTDKPMYYDAILNGVEIFKISDSTGNLAGTNPIPPPVQDKIDISTARAHNHGKSKNHTSIIAGGVAGGVVVLLVIGIFAFAASRRRRQGKDSGASEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKSATNNFDEALLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSDQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPALAKEQVSLAEWAAHCYIKGILDQIIDPYLKGKIAPECFKKFAETAMKCVADQGIDRPSMGDVLWNLEFALQLQESAEESGSGFGGIHNEEEPLYTDSKGKKDSDALPFDGNVTDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00900 968 ProSitePatterns Protein kinases ATP-binding region signature. 617 640 IPR017441 GO:0005524
Spst1g00900 968 SUPERFAMILY Protein kinase-like (PK-like) 585 884 IPR011009 -
Spst1g00900 968 Pfam Protein tyrosine and serine/threonine kinase 617 879 IPR001245 GO:0004672|GO:0006468
Spst1g00900 968 MobiDBLite consensus disorder prediction 926 961 - -
Spst1g00900 968 SMART serkin_6 611 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00900 968 PANTHER OS03G0124300 PROTEIN-RELATED 79 553 IPR046957 GO:0004672
Spst1g00900 968 Gene3D Transferase(Phosphotransferase) domain 1 688 898 - -
Spst1g00900 968 Gene3D Phosphorylase Kinase; domain 1 596 687 - -
Spst1g00900 968 FunFam FERONIA receptor-like kinase 288 484 - -
Spst1g00900 968 FunFam Receptor-like protein kinase FERONIA 688 898 - -
Spst1g00900 968 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Spst1g00900 968 MobiDBLite consensus disorder prediction 895 968 - -
Spst1g00900 968 MobiDBLite consensus disorder prediction 907 923 - -
Spst1g00900 968 ProSiteProfiles Protein kinase domain profile. 611 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00900 968 Gene3D - 289 483 - -
Spst1g00900 968 Gene3D - 103 263 - -
Spst1g00900 968 FunFam Receptor-like protein kinase FERONIA 583 687 - -
Spst1g00900 968 Pfam Malectin-like domain 106 483 IPR024788 -
Spst1g00900 968 CDD STKc_IRAK 617 883 - -
Spst1g00900 968 FunFam FERONIA receptor-like kinase 103 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00900 Spst-Chr1 11295001 11299167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00900 87 968 Receptor kinase-like Gene Family AT3G51550 74.011 0.0 1324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst1g00900 Malectin_like 4e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00900 - - gmx:100499644 1599.72