Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00885 ATGTTGATGTCAGGTGGGACCCAGAGGATCCTCTTCGCCGTTGATCTGAGTGCTACGTTGGAATCGGACGGTCGAAATTCAGAGGCGTTTTCGTCGACGAATCAAAACCGCAAAAAAGTTCCGATTTTTACCCATTTCGCTGCCCCTGGATCGCTTCACTCTGAGTTGCATGAACTGCCCTTTCTTGCAAAGGTAATGTGGGTCGGTGGGGAAAGATTCTTGTTGGCTCAGAGGTCTGCAAGATATCTTCCAAATAGTTCTCAGTCATACATAGATGCAAGGATGCAGTGGACCAATGATCAGGGTATTGGCCCTGAGGGCATAAAGAGTTCTCTACAACAACCAAGTTCTGTAAAAAGGATGGGGTGTTTCACTGTATTGAAGAGCAAGAAAAAAAGGTCTGATCCAATTACATATGTTAAACGTGTTAGCCATAATGAGCACGTGCCTACAGTATTGCCTGAACCTCAAACGCGCTCACTCCAGTCTGCTCCTCCCAGTTTTAGGACCAGAGTGAAACCCATTCAACCCATTAATAAAGTCAATAACAACAGAACAAGAACATTATCTGCTCCATCAACACTTGATGCCGCAGAACAAGATGCATTGGCCTCAATTGAATATGAGGAACAAGAAGAATCAAAACACCGAGCTGGATCAATGAAGGAGCAGCATTCATCTAGTCCACAACCTTTACCACTCCCATCACCTCAGGGAGGTGCTGCATTGAAGGCTATTGGCAGCTTTAAGTCAGTGACAGCTGGTGGTCCTCTATCTGCTTCTGGACCTTTGCCACTTCCACCTACTGGGTCACTTCGGAATTTTCTGTATGATGAAATTGCCACAGCTTGCCACAATTTCTCTTCTGATAGATGCATGTCAGAATGTCTTTCGTCCACCATATATAAGGCTTCCTTTGGTGATGATGTTTCTAGTTCAAAGAAGTTTGAAGCCACTGTCACACGGCTTCACCCATCATTTCAGGGCTTGAAGGAATTCATGAATGAAGTTAACACTCTTGCATCCTTGCAACATCCAAACCTCTGTAAATTGCTAGGATTTCATGCCCGAGAGGGTTCAGAAAATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGATCGCTTATTGTATGGGAGATCTGATGGGCCATCAATTGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTCTAACTTTCTTGCACGAAGAAGGGCCCTTTCAGGCAATGTATAACGAATTCTCGACAGCAAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCGGGATATGGTTGTGTTGGACATATTCCCGAGGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAGACATTGGAGAAAGGAATGCTCACTCCAAAGAGCAACGTATGGAGCTTTGGAATTTTTCTTCTGGAGCTACTTACAGGAAGAAAGAATCTTGATAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGCCGGCCCTTCCTTGCGGACAACTATCGTCTGTCATTGATCATGGATCCTCAACTCAAGGGTCGCTTTCCTTCTAAAGCAGCAAGAACAATAGCTGACATTGCACAAAAATGTCTTCAAAAGGAGCCTTCAGACAGACCTACCATGAGAACTGTTGTTGAGCATCTGAAGATGATACAGGATTTGAAATATTCGTGCCGGTTCCCACTGCAAGAGCCAGCATCAAACTCTGGAAAACATATGTCAAGATCACCAAGTCTCAATGGGATTATCTGCCCAGTACCAAGGTTGAATTTCTCACCATCACCACCATCAGGTGTTCCACCAGTACCTGTTTCACCTCCAAGATGGTCTGGTGGAGTGCCCCTTCTCCTCCCTCCACGCGCATGTTCTTCCAGTCTTTCTTTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA 2001 0.4483 MLMSGGTQRILFAVDLSATLESDGRNSEAFSSTNQNRKKVPIFTHFAAPGSLHSELHELPFLAKVMWVGGERFLLAQRSARYLPNSSQSYIDARMQWTNDQGIGPEGIKSSLQQPSSVKRMGCFTVLKSKKKRSDPITYVKRVSHNEHVPTVLPEPQTRSLQSAPPSFRTRVKPIQPINKVNNNRTRTLSAPSTLDAAEQDALASIEYEEQEESKHRAGSMKEQHSSSPQPLPLPSPQGGAALKAIGSFKSVTAGGPLSASGPLPLPPTGSLRNFLYDEIATACHNFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSFQGLKEFMNEVNTLASLQHPNLCKLLGFHAREGSENRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQKCLQKEPSDRPTMRTVVEHLKMIQDLKYSCRFPLQEPASNSGKHMSRSPSLNGIICPVPRLNFSPSPPSGVPPVPVSPPRWSGGVPLLLPPRACSSSLSLEELDRQESRKSSSSASRRASVEGF 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00885 666 Gene3D Transferase(Phosphotransferase) domain 1 370 574 - -
Spst1g00885 666 Pfam Protein tyrosine and serine/threonine kinase 310 562 IPR001245 GO:0004672|GO:0006468
Spst1g00885 666 MobiDBLite consensus disorder prediction 640 666 - -
Spst1g00885 666 MobiDBLite consensus disorder prediction 208 240 - -
Spst1g00885 666 MobiDBLite consensus disorder prediction 208 222 - -
Spst1g00885 666 ProSiteProfiles Protein kinase domain profile. 287 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00885 666 SUPERFAMILY Protein kinase-like (PK-like) 265 572 IPR011009 -
Spst1g00885 666 Gene3D Phosphorylase Kinase; domain 1 268 368 - -
Spst1g00885 666 PANTHER OS01G0588500 PROTEIN-RELATED 214 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00885 Spst-Chr1 11193492 11199592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00885 259 566 Receptor kinase-like Gene Family AT4G02010 37.380 1.59e-55 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Spst1g00885 PK_Tyr_Ser-Thr 5.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00885 - - gmx:100808712 969.148