Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00878 ATGAGTTTCAGAGAGGGTAAGATAGGAGAAGAGAGGGAATGTGAAGAATCAGTGTTGGGGAGCACTGAATCCAAATCGGCGAAGGAAAATGGGTCTTTGACAGACACACAGCTAACAATTGATGAGAATCTATTGGTTGACCCTAAACTACTCTTTATTGGGTCCAAGATAGGTGAAGGAGCTCATGGGAAAGTTTATGAAGGAAGGTATGGGGATCAAATTGTTGCAATCAAAGTTCTGCATCGTGGGAGCACTTCCGAAGAAAGAGCTTCCCTTGAAAATCGTTTTGCTCGAGAAGTTAATATGATGTCTCGTGTCCACCACGACAATCTTGTTAAGTTTATTGGAGCATGTAAGGATCCTCTTATGGTAATAGTTACAGAGCTATTACCAGGGATGTCATTGCGTAAATATTTAATGAGTATCCGTCCTAAACTATTAGACCTTCATGTGGCTATAAACTTTGCTCTTGATATTGCACGAGCCTTGGATTGGCTACATGCCAACGGGATCATACACAGAGATCTGAAACCTGACAATCTGTTACTTACAGCCAACCAGAAGTCTGTTAAACTTGCCGATTTCGGCCTCGCAAGAGAAGAAACTGTGACTGAAATGATGACCGCAGAAACAGGAACTTACCGTTGGATGGCACCAGAGTTGTACAGTACTGTGACTTTGCGCCAGGGAGAGAAAAAGCACTATAACAACAAGGTTGATGTATATAGCTTTGGAATTGTTCTGTGGGAGCTACTAACAAACCGCATGCCATTTGAAGGGATGTCCAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCCAGCATTCCAGATGATTTATCCCCTGAACTTGCATTTGTCATACAATCATGCTGGGTTGAAGATCCTAACTTGAGACCGAGTTTTAGTCAGATCATCCGCATGCTCAATGCGTTTCTCTTCACTCTCTCACCACCATCTCCTCCTTTGCCAGTACCTAACAATGAACCCGAGGTGGCTACAACCAGTAATGGCACCATTACTGAGTTTTCTGCCCGAAACAGAGGAAAGTTTGGTTTTCTTCGCCAATTGTTTTCTTCTAAGAGGACCAAAAACTAA 1107 0.43 MSFREGKIGEERECEESVLGSTESKSAKENGSLTDTQLTIDENLLVDPKLLFIGSKIGEGAHGKVYEGRYGDQIVAIKVLHRGSTSEERASLENRFAREVNMMSRVHHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLMSIRPKLLDLHVAINFALDIARALDWLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPDDLSPELAFVIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPPSPPLPVPNNEPEVATTSNGTITEFSARNRGKFGFLRQLFSSKRTKN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00878 368 Pfam Protein tyrosine and serine/threonine kinase 53 312 IPR001245 GO:0004672|GO:0006468
Spst1g00878 368 MobiDBLite consensus disorder prediction 1 33 - -
Spst1g00878 368 Gene3D Transferase(Phosphotransferase) domain 1 134 323 - -
Spst1g00878 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Spst1g00878 368 CDD STKc_MAP3K-like 57 312 - -
Spst1g00878 368 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 313 - -
Spst1g00878 368 PRINTS Tyrosine kinase catalytic domain signature 165 183 IPR001245 GO:0004672|GO:0006468
Spst1g00878 368 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Spst1g00878 368 PRINTS Tyrosine kinase catalytic domain signature 127 140 IPR001245 GO:0004672|GO:0006468
Spst1g00878 368 PRINTS Tyrosine kinase catalytic domain signature 239 261 IPR001245 GO:0004672|GO:0006468
Spst1g00878 368 MobiDBLite consensus disorder prediction 1 19 - -
Spst1g00878 368 Gene3D Phosphorylase Kinase; domain 1 39 130 - -
Spst1g00878 368 SMART serkin_6 51 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00878 368 FunFam Kinase suppressor of Ras 1 40 130 - -
Spst1g00878 368 ProSitePatterns Protein kinases ATP-binding region signature. 57 78 IPR017441 GO:0005524
Spst1g00878 368 SUPERFAMILY Protein kinase-like (PK-like) 49 337 IPR011009 -
Spst1g00878 368 ProSiteProfiles Protein kinase domain profile. 51 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00878 Spst-Chr1 11121651 11124759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00878 39 368 MAP Kinase Kinase Kinase AT5G01850 74.576 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Spst1g00878 PK_Tyr_Ser-Thr 1.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00878 - - qsa:O6P43_016485 598.971