Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00874 ATGGAATTGCCTGATACAATCAGTACAGCCATGTACAAGGGGCGATTCTGCACGAGTGGTGGAGTTAAATCTCAGCTTGGATATGTTGAAACTGATCCATCTGGTCGATATGGCCGTTTCAGGGATGTTCTTGGCAAAGGAGCAATGAAGACTGTGTACAGGGCATTTGATGAATTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCACTCCCCAGAACAACTTCAGCGGCTTTATTCAGAGGTTCATCTCCTGAAGCACCTCAACCATGACTCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAACAACAGAACCTTCAACTTCATCACTGAATTGTTCACCTCCGGCACACTTAGAGAGTATAGGCAGAAGTATAAGCGAGTAGATATCCGAGCAGTTAAGAATTGGGCTCTCCAGATTCTTAGTGGTTTGGAGTATTTGCACAGCCATAATCCTCCTGTAATACATAGAGATCTCAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGGAGGGTCAAGATTGGTGACTTAGGCCTAGCAGCAATACTTCGCAGCTCCCAACATGCCCACAGTGTCATAGGCACACCAGAATTCATGGCACCAGAACTATATGAAGAGAAATACAACGAGCTGGTAGACATATATTCCTTTGGTATGTGCATGATAGAGTTGCTTACTTTTGAGTTCCCATACAGTGAATGCGCCAACCCAGCTCAAATATACAAGAAAGTTTCTTCGGGGAAGCTACCCAATGCGTTTAGCAGAATCCCAGATTTGGAAGCCCAGAAGTTTGTGGGAAAATGTTTGGCAAATGTCTCAGATAGACCATCAGCGAAGGAGCTCTTGTTGGACCCTTTTTTAACCATGGACCAACTTGAAATACCATTGCCACCAAACATACCATTACCTCCAAATCACACTCAAAAGTTTAATTCCATTCCACTAGTTCCCATTGAACATCATCGTGATCAAACAAAGAGTGCCGAAATGACAATTACTGGTTCAATAAACGAAGAGGACAACACTATTTTTCTCAGAGTGAGGATATCTGACATAATGGGGCACACGAGACATGTGTTCTTCCCATTTGATACATTAAAAGACACGGCTATTCAGGTGGCGATGGAGATGGTGCAAGAACTTGAGATTAGCCACTTGGAACCATTGGAGATTGCTGCAATGATAGATCATGAGGTATCAACTTTAGTTCCAACTTGGAGGGACAGGGTTAAGTGTCACCACCAACGACAGCACAGCTTTAACTACGAAGAAGATGAAGATGTCAATAATCATCACCCCTTCTTCTTATCATCTTCTCCATCATCCCCTCGAGGTTCTGGCCACATGTCTGCTTCCAACACCTTCAAGACCCATGTTCGTCGCAACCATTACCCTTATGCTCAAGAATGGCCTCAAGGTACCTACTCCTTTAAATTAGACTCTACATGCAGTATGAACTACACAAAAATTTTGTTGCTGGTAAGAATCATAAGTCACTTGGAACTCTTCGCAGATGACATGTTCATGAACAACGAAGACACAATTTCTCAAGCCTCGATGAACTCTTTCAAGTATTCAACATTCCAGTTCTGCGATGCAAGCCACGAAGACGAGCACGACGGAACCGAACGCAACAAGTGCACCACATTGTCGTACCGTGGAGGCGAAGAAGCCGAACCCAGTTTGGCGAAACCGGTTTTGTACCCGCCTCGGATGGGGTGTTCGTGTGGGTGCAGGTTCGGCTCGGGCCACGACTGCCCGAGGCTGACTCGGATCCGGTCGTGCCCGCACGAGCGGCGGAGCCAGCAGCTCCGGCGATCGATGATGTTGGACGAGATTCACAAGTACAAAAGACGCTTCTTCAACACCGTTGGTGCTGTTGAGAACATCGGGTTTCGGCATCCACTAAGAGGTGGTGCGTGCTTTCCTCCTGTGTAG 1965 0.4595 MELPDTISTAMYKGRFCTSGGVKSQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLNHDSMMIFYGSWIDVNNRTFNFITELFTSGTLREYRQKYKRVDIRAVKNWALQILSGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIELLTFEFPYSECANPAQIYKKVSSGKLPNAFSRIPDLEAQKFVGKCLANVSDRPSAKELLLDPFLTMDQLEIPLPPNIPLPPNHTQKFNSIPLVPIEHHRDQTKSAEMTITGSINEEDNTIFLRVRISDIMGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAAMIDHEVSTLVPTWRDRVKCHHQRQHSFNYEEDEDVNNHHPFFLSSSPSSPRGSGHMSASNTFKTHVRRNHYPYAQEWPQGTYSFKLDSTCSMNYTKILLLVRIISHLELFADDMFMNNEDTISQASMNSFKYSTFQFCDASHEDEHDGTERNKCTTLSYRGGEEAEPSLAKPVLYPPRMGCSCGCRFGSGHDCPRLTRIRSCPHERRSQQLRRSMMLDEIHKYKRRFFNTVGAVENIGFRHPLRGGACFPPV 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00874 654 ProSiteProfiles Protein kinase domain profile. 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00874 654 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 24 519 - -
Spst1g00874 654 SUPERFAMILY Protein kinase-like (PK-like) 40 332 IPR011009 -
Spst1g00874 654 SMART serkin_6 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00874 654 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Spst1g00874 654 Gene3D Transferase(Phosphotransferase) domain 1 121 301 - -
Spst1g00874 654 FunFam Probable serine/threonine-protein kinase WNK1 23 119 - -
Spst1g00874 654 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00874 654 CDD STKc_WNK 36 296 - -
Spst1g00874 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Spst1g00874 654 FunFam probable serine/threonine-protein kinase WNK9 121 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00874 Spst-Chr1 11090890 11094366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00874 19 436 MAP Kinase Kinase Kinase AT3G51630 66.271 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst1g00874 Pkinase 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00874 K08867 - gmx:100272206 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00874 1 11090890 11094366 Spst1g00874 1 11090890 11094366 ECH