Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00868 ATGAGAGAGGAGCAGAACGACACCGTTGCGACCGAACTAGCAACCAAAAACGACGGCGCGTCATCCGGCGTCGTTTTGTTCGGCAAGTACGAGTTGAAGAGGTTACTGGGAGTTGGCGCGTTCGCCAAGGTGTACCACGCCACAAGTCTGGACACGAGCCAGAGTGTGGCGGTGAAGGCCGTGAGCAAAAGCAAGGTATTGAACGGAGGTTTCACCGCCAACGTGGAACGCGAGATCTCTATCATGCGCCGCCTCCGTCACTCCAACATCGTTGACCTCTTCGAAGTCCTGGCGACGAAGACGAAAATCTATTTTGTCATGGAGTTCGCCGGCGGCGGCGAACTCTTCCACGAGGTCGCCCGCAAGGGCCGGCTCGCGGAGAATGCCGCCAGGTTTTACTTCCGCCAACTCATCTCCGCCGTGAAACACTGCCACTCGCGCGGCGTGTTCCACCGCGACCTCAAGCTCGATAATCTCCTGCTCGACGAGAACGGGAGTTTGAAAGTCTCCGATTTCGGGTTGAGCGCCGTCACGGGTCAGATCCGACCCGATGGGTTGTTACACACGGTCTGTGGGACCCCTACCTACGTGGCACCTGAGATTCTCGTGAAGAGAGGCTACGATGGTGCGAAAGTGGATCTGTGGTCGTGCGGCGTCGTTTTGTTCGCGCTTACTGCAGGTTATTTACCCTTCAATGATTACAACATCACCGTTTTGTACAGGAAGATTTACCGCGGTCAATTCCGGTTCCCTAGGTGGATGTCTACTGATCTGAGGTTTCTCTTATCACGCTTGCTGGACACGAATCCCGAGACCAGGATCACCGTTGACGATATCTACCAGGACACGTGGTTCAACGCGGGTGAGGACCTGTACGACCCGGTTCTGGTCAAGGAGAGTAAGTGCACCTGTGGAGAGAGCCGAACCGGGTTCAAATCCTTGAACGCGTTTGACCTAATTTCATTTTCGACCGGGTTGGACATGTCGAGTCTTTTCGAGGATCCGAACGGATCAGACTCGGTGGAACGGGTTGTTTCCGCGGCGGCGCCGGAGAATGTTATGGAGAGGGTGGAGGCGGCGGCGGAGGAGGGAAGGGTGGTGGTGAAGAGGGAGGGGAATGGTGGTGGAGCGAAGTTGGAAGGGCAAGATGGTAATTTGATAGGTCTCGTGGTGGTGTACCGGTTAACGGAGGAGCTGGTGGTGGTTGAAATGAAGAGGAGCGAGAAGGGAAGGGAATGTGGTGCACAATTTTGGAAAGATAAATTGCGCCCCCTGCTTCATGAATTGGCACGTGAACGGGAAGCGCCGGTTCCCGGTGACTTCTGTAAAATATAG 1335 0.5536 MREEQNDTVATELATKNDGASSGVVLFGKYELKRLLGVGAFAKVYHATSLDTSQSVAVKAVSKSKVLNGGFTANVEREISIMRRLRHSNIVDLFEVLATKTKIYFVMEFAGGGELFHEVARKGRLAENAARFYFRQLISAVKHCHSRGVFHRDLKLDNLLLDENGSLKVSDFGLSAVTGQIRPDGLLHTVCGTPTYVAPEILVKRGYDGAKVDLWSCGVVLFALTAGYLPFNDYNITVLYRKIYRGQFRFPRWMSTDLRFLLSRLLDTNPETRITVDDIYQDTWFNAGEDLYDPVLVKESKCTCGESRTGFKSLNAFDLISFSTGLDMSSLFEDPNGSDSVERVVSAAAPENVMERVEAAAEEGRVVVKREGNGGGAKLEGQDGNLIGLVVVYRLTEELVVVEMKRSEKGRECGAQFWKDKLRPLLHELAREREAPVPGDFCKI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00868 444 CDD CIPK_C 315 426 - -
Spst1g00868 444 Gene3D Transferase(Phosphotransferase) domain 1 23 312 - -
Spst1g00868 444 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Spst1g00868 444 SMART serkin_6 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00868 444 Gene3D Kinase associated domain 1, KA1 313 431 - -
Spst1g00868 444 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00868 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Spst1g00868 444 Pfam NAF domain 312 369 IPR004041 GO:0007165
Spst1g00868 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 24 412 - -
Spst1g00868 444 ProSiteProfiles Protein kinase domain profile. 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00868 444 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Spst1g00868 444 FunFam Maternal embryonic leucine zipper kinase 24 303 - -
Spst1g00868 444 SUPERFAMILY Protein kinase-like (PK-like) 26 292 IPR011009 -
Spst1g00868 444 FunFam Aurora kinase A 24 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00868 Spst-Chr1 11035088 11036422 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00868 26 423 CBL-interacting serine-threonine protein kinases AT2G30360 56.931 3.90e-158 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst1g00868 Pkinase 5.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00868 - K12761 gmx:100788245 686.026