Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00863 ATGGATCAGATGGGAAGTGTGCTTCTGGAAAGATATGAACTTGGTAGATTATTAGGCCAAGGGACCTTTGCAAAGGTCTACCATGCTAGGAATCTGATAACTGGCATGAGTGTGGCCATTAAGGTAATTGATAAAGAAAAAATTTTGAAAGTTGGACTGGTTGATCAGATTAAGCGTGAAGTTTCAGTGATGAGATTAATCAGACATCCACATGTAATTAAGTTTTATGAGGTTATGGCCACTAAAACCAAAATTTACTTTGTCATGGAGTATGCAAAAGGTGGTGAGCTCTTTAACAAGGTACTCAAAGGAAAGCTCAAGGTGGATGTTGCTAGGAAATATTTTCAGCAACTGATTAGTGCTGTTGACTACTGCCATAGCAGGGAGGTGTGTCATCGAGACTTAAAACCTGAAAATCTACTTTTGGATGAAAATGACGATTTGATGGTTTCAGACTTTGGGTTGAGTGCCCTTACTGAATCCAAGTGCAAAGATGGATTACTCCATACTACATGTGGTACCCCTGCCTATGTTGCTCCAGAAGTGATAAACAGAAAAGGTTATGATGGGATGAAAGCAGATGTATGGTCATGTGGGGTAATCTTGTACGTTCTGTTGGCTGGTCATCTTCCATTCCATGATTCAAATCTGATGGTGATGTACAGGAAAATTAGTAAAGGTGAATTCAAATTTCCTAAATGGTTTGAACCGGATGTCCGCCGGTTATTGATCAGAATGCTAAATCCAAACCCAAAGACCAGGATATCAATAGACAAGATTATGAAAAGTTCATGGTTTAAGATGGGGTGGAAGAAGCCTGCTACTACTGCTACCGAAAACCAAGAACTAGCTCCCCTGGATGCCGATGGAATATTTAAAGTGTGCGAGAATGGTGGTCCAGAGCCAAAGCATGAACTGACCATGCCTTGTAACTTAAATGCTTTTGATATTATCTCCTTCTCAACTGGTTTTGATTTATCTGCTTTGTTCGAGGACACCGTTCTCAAGAAACAGATGCGGTTCATGTCGAATAAGCCGGCCTCGAGTATAATCTCCAAGTTGGAAGAAATTTGTAAGCAGCTTTGTTTGAAAGTAACCAAGAAAGATGGAGGCTTGTTCAAGTTGGAAGGTTCCAATGAAGGCAGGAAAGGTACTTTAGGTGTTGATGCTGAGATTTTTGAGATTACCCCACACTTGCACATAGTGGAATTTAGAAAGCTCAATGGGGATACCATGGAGTACCAGAAGCTTTTTAGACAGGATATTAGACCAGCACTTCAGGACGTTGTTTGGACCTGGCAAGGAGAAAATCCACAGGAAGAACAGCAGCAACATCAAGTAGTCCAGGAAGAGCACCAACCTTCTCCTACTGCTTAG 1377 0.4118 MDQMGSVLLERYELGRLLGQGTFAKVYHARNLITGMSVAIKVIDKEKILKVGLVDQIKREVSVMRLIRHPHVIKFYEVMATKTKIYFVMEYAKGGELFNKVLKGKLKVDVARKYFQQLISAVDYCHSREVCHRDLKPENLLLDENDDLMVSDFGLSALTESKCKDGLLHTTCGTPAYVAPEVINRKGYDGMKADVWSCGVILYVLLAGHLPFHDSNLMVMYRKISKGEFKFPKWFEPDVRRLLIRMLNPNPKTRISIDKIMKSSWFKMGWKKPATTATENQELAPLDADGIFKVCENGGPEPKHELTMPCNLNAFDIISFSTGFDLSALFEDTVLKKQMRFMSNKPASSIISKLEEICKQLCLKVTKKDGGLFKLEGSNEGRKGTLGVDAEIFEITPHLHIVEFRKLNGDTMEYQKLFRQDIRPALQDVVWTWQGENPQEEQQQHQVVQEEHQPSPTA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00863 458 Pfam NAF domain 309 367 IPR004041 GO:0007165
Spst1g00863 458 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Spst1g00863 458 MobiDBLite consensus disorder prediction 436 458 - -
Spst1g00863 458 Gene3D Transferase(Phosphotransferase) domain 1 4 311 - -
Spst1g00863 458 FunFam Non-specific serine/threonine protein kinase 307 431 - -
Spst1g00863 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Spst1g00863 458 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Spst1g00863 458 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00863 458 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00863 458 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Spst1g00863 458 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 426 - -
Spst1g00863 458 CDD CIPK_C 313 427 - -
Spst1g00863 458 Gene3D Kinase associated domain 1, KA1 312 432 - -
Spst1g00863 458 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00863 458 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Spst1g00863 458 FunFam Non-specific serine/threonine protein kinase 6 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00863 Spst-Chr1 10957013 10958389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00863 1 436 CBL-interacting serine-threonine protein kinases AT5G58380 62.832 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst1g00863 Pkinase 3.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00863 K07198 - gmx:100811923 755.747