Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00853 ATGGGGATAGTTTCATCCCAATTGTCCTCTAACTTTTATTCCACAACGTGTCCTAATGCACTTTCAACCATTAAGAGTGGAGTTGATTCTGCAGTGAGCAATGAAGCTCGCATGGGGGCATCCCTCCTACGTCTCCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCAGTGCTATTGAATGATACATCAAGTTTCACAGGTGAACAAACGGCTCGACCCAACGTGAATTCCTTAAGGGGTTTTGGTGTAATAGACGACATTAAGTCTCAACTGGAGAGCTTGTGCCCTGGTGTTGTTTCTTGTGCCGATATTCTCGCTGTAGCAGCAAGAGACTCAGTCGTTGCTCTTGGTGGACAAAGTTGGACAGTGCAATTGGGCAGAAGAGACTCAACCACAGCAAGTTTAAGTTCTGCAAACTCTGACTTACCTGGTTTTGCTTCCACTCTACAACAACTTGTCGATGCTTTCTCCAGAAAAGATTTCACCACAGAAGAAATGGTTGCCCTGTCAGGAAGTCACACAATTGGGCAAGCTAGTTGTTCGACCTTCAGAGCAAGGATTTACAACGACACCAACATAGATTCCTCTTTTGCAACATCGTTGCGAGCAAATTGTCCTAGCGTAGGTGGTGACCGAAATTTGGCCCCTCTTGACACCACCCCAACCACCTTTGACAATACTTATTTCCAGAATTTGCAGAGCCAAAAGGGTCTCTTGCACTCAGATCAAGAGCTTTTCAATGGAGGATCCACTGATTCTCAAGTAAATGGTTATGTCAGCAACCCTTCGAGTTTTCAAACTGATTTTGCCAATGCAATGGTGAAAATGGGGAACCTTGGTCCACTCACTGGGTCTACTGGCGAGATCAGAACCGACTGTTGGAAGACCAATTAA 900 0.45 MGIVSSQLSSNFYSTTCPNALSTIKSGVDSAVSNEARMGASLLRLHFHDCFVQGCDASVLLNDTSSFTGEQTARPNVNSLRGFGVIDDIKSQLESLCPGVVSCADILAVAARDSVVALGGQSWTVQLGRRDSTTASLSSANSDLPGFASTLQQLVDAFSRKDFTTEEMVALSGSHTIGQASCSTFRARIYNDTNIDSSFATSLRANCPSVGGDRNLAPLDTTPTTFDNTYFQNLQSQKGLLHSDQELFNGGSTDSQVNGYVSNPSSFQTDFANAMVKMGNLGPLTGSTGEIRTDCWKTN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00853 299 CDD secretory_peroxidase 7 298 IPR033905 GO:0004601|GO:0042744
Spst1g00853 299 SUPERFAMILY Heme-dependent peroxidases 7 299 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Plant peroxidase signature 100 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Plant peroxidase signature 233 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Plant peroxidase signature 217 232 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Plant peroxidase signature 81 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Plant peroxidase signature 119 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Plant peroxidase signature 166 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Plant peroxidase signature 17 36 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Plant peroxidase signature 41 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Plant peroxidase signature 273 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 ProSitePatterns Peroxidases proximal heme-ligand signature. 167 177 IPR019793 -
Spst1g00853 299 Gene3D Peroxidase, domain 2 145 278 - -
Spst1g00853 299 ProSitePatterns Peroxidases active site signature. 39 50 IPR019794 GO:0004601
Spst1g00853 299 PRINTS Haem peroxidase superfamily signature 101 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Haem peroxidase superfamily signature 219 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Haem peroxidase superfamily signature 167 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Haem peroxidase superfamily signature 119 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PRINTS Haem peroxidase superfamily signature 39 53 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 ProSiteProfiles Plant heme peroxidase family profile. 7 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 PANTHER PEROXIDASE 72-RELATED 5 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 Pfam Peroxidase 26 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00853 299 Gene3D - 11 295 - -
Spst1g00853 299 FunFam Peroxidase 145 278 - -
Spst1g00853 299 FunFam Peroxidase 11 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00853 Spst-Chr1 10880829 10882842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00853 3 299 Peroxidase AT5G05340 65.333 4.45e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00853 K00430 - gmx:100800219 511.146