Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00852 ATGAAGTTTCATTTTACGTCTTGCAATTTCAAATACTTCAATATCGCCATGACCCTTTCGAATATCATCATACTTCAGTTTTTCTTACTCTCTTGCCTTATTGGGATAGCCTCAGCCCAGTTATCTTCTACCTTTTATGCCAAAACGTGTCCTAATGCACTTTCAACCATTAAATCAGAAATAACATCTGCTGTTAACAGCGACCGACGCATGGGAGCTTCATTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCAGTGCTGTTGGATGACACATCAAGTTTCACAGGTGAAAAATCAGCGGGTCCTAACGCTAATTCCCTAAGAGGCTTTGATGTAATAGACACCATAAAGTCCAAAGTGGAGAGCTTATGCCCTGGTGTTGTTTCGTGTGCTGATATACTTGCTGTAGCAGCAAGAGACTCAGTCGTTGCACTTGGTGGAGCTAGTTGGACTGTGCCATTGGGTAGAAGAGACTCAACCACTGCAAGTTTAAGTTCTGCTAACTCAGACTTGCCTGGTCCCTCTTCAAGTTTAAGTTCCCTCATCTCTTCTTTCTCCAACAAAGGTTTTACAGCTAAAGAACTGGTTGCTCTTTCAGGATCGCACACAATTGGCCAAGCGAGGTGCGTAACTTTCAGAACAAGGATTTACAACGACACGAACATAGATTCCTCTTTCGCAACATCATTGCAGGCAAATTGCCCTAGCACAGGTGGAGACAGCACGCTGTCCCCTCTTGACACCACCAGCCAAAACACCTTTGACAATGCCTACTTCAAGAATTTGCAGAGCAAAAAGGGTCTCCTTCACTCAGACCAGGAGCTTTTCAATGGCGGATCCACTGACTCTCAAGTAAATGCTTACAGCAGCAACCCTCTAAGTTTCCAAACTGACTTTGGCAATGCAATGGTTAAAATGGGGAACCTTAGTCCACTCACTGGGTCTAGTGGCCAGATCAGAACCAATTGTAGGAAGACCAACTAA 1002 0.4411 MKFHFTSCNFKYFNIAMTLSNIIILQFFLLSCLIGIASAQLSSTFYAKTCPNALSTIKSEITSAVNSDRRMGASLLRLHFHDCFVQGCDASVLLDDTSSFTGEKSAGPNANSLRGFDVIDTIKSKVESLCPGVVSCADILAVAARDSVVALGGASWTVPLGRRDSTTASLSSANSDLPGPSSSLSSLISSFSNKGFTAKELVALSGSHTIGQARCVTFRTRIYNDTNIDSSFATSLQANCPSTGGDSTLSPLDTTSQNTFDNAYFKNLQSKKGLLHSDQELFNGGSTDSQVNAYSSNPLSFQTDFGNAMVKMGNLSPLTGSSGQIRTNCRKTN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00852 333 Gene3D - 44 330 - -
Spst1g00852 333 ProSiteProfiles Plant heme peroxidase family profile. 40 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Spst1g00852 333 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Spst1g00852 333 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Spst1g00852 333 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 FunFam Peroxidase 44 184 - -
Spst1g00852 333 FunFam Peroxidase 178 312 - -
Spst1g00852 333 SUPERFAMILY Heme-dependent peroxidases 40 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 CDD secretory_peroxidase 40 332 IPR033905 GO:0004601|GO:0042744
Spst1g00852 333 PANTHER PEROXIDASE 72-RELATED 37 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 Pfam Peroxidase 58 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00852 333 Gene3D Peroxidase, domain 2 178 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00852 Spst-Chr1 10868266 10871275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00852 36 333 Peroxidase AT5G05340 65.000 4.79e-146 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00852 K00430 - gmx:100815142 543.888