Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00825 ATGACCATGGGAGATCATAATAACTGGGGAACTTCTGAACTTAATCATCATCAAGTTGAACTTGATGTTCCAAAATTCAAGTCTGTTCAACCTCCTTCACCACCCCTCTCTCCCTCTCCAGCCTCCCCTTCTTCTTACTTGGCCTTTTCATCTGCTTTCAGCCCATCTGAGTTTTTGAACTCTCCTGTGTTTTTTCCTTCTCCAAATACTTTTGCATCTTCTACTACTGAGGCTTTGGCTGGTCAGACCTTCAACTGGAGGAGCGTTTCAGGAGAAGAACAACAACGTGACAAGGAAGATGAGAAAAACTACTCTGACTTCTCTTTCCAAACCCATATTCAATCTTCCTCAGACATGTTTCAAGTGGAACCACTTAAGAAACAAGATATATGGAAGTTCAATGAACCTTCAGAGCAAACTGATTTTTCATCTGAGAGGACAGCAACACAATCTGAATACCCTTCAATTCAGAGCTTTTCCTCACTAATGGCATCAGGCAAACCGGAATTACAAAGCAACTCAGTTCCCGGGTCTGGTTATTTTGATTATGCCAATGCATCTCAGGCTGTTAGAGAACAGAAGAGATCAGGAGACGGGTTCAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGAAGTGAAAATCCTCGAAGTTATTATAAGTGTACACATCCAAATTGCTCAGTGAAGAAGAAAGTGGAGAAGTCTTTGGATGGACAAATTACTGAAATAGTATATAAGGGCCATCATAACCACCCAAAACCACAGTCTACTAGAAGAACAAACTCTCAATCAATTCATCAACCTTCTTCATCTTGCACAAACTCAGGGATTTCTGATCAATCAGTGGTGACCCTAGGGAATCCACAAATGGACCACTTCTCCATACAAGAAGATTCTTCAGCTTCTGTAGGAGAGGAAGAGTATGAGCAAACATCCCAAACCAGTTATTCTGGGGGAGATGAAGATAACCTTGCGCATGAGGCCAAAAGATGGAAGGGAGATAATGAAAACGATGGCTACTCCGCCTCAGGGAGTAGAACTGTGAGAGAGCCTAGAGTTGTAGTTCAAACCACAAGCGAAATTGATATACTTGATGATGGATTTAGGTGGAGGAAATATGGACAGAAGGTAGTGAAAGGAAACCCAAATGCAAGGAGCTATTACAAATGCACGGCCCCTGGTTGTTCAGTGAGAAAACATGTTGAGCGAGCTGCACATGATATCAAAGCTGTGATCACAACTTATGAAGGGAAACACAACCATGATGTGCCTGCTGCACGAGGTAGCGCAAGTTATAACATGAACAAAAATTCTCTGAACAGTAACATATCGGCTCCTATAAGACCCTCGGCAGTGAACTGTTATTCTAGCTCATCAGGTTTAACAAATTCTCTCTACAATAATACCAGGCTTCCAGCAATCGGAAATCAAGAATCATTTGCACTGGACAAGTTCAAAAACCCTGAAAGTTTTGGCCATTCAGCTCTTACCAAATCAATGGGTTCATATGGCGATCATGCACCATACTCAGATGCTGCATACTCAAATGCCAAGGATGATAGGAAGGATGACTCATTCCTTCAGTCATTTCTATCAAAGGACTTCTAA 1611 0.4184 MTMGDHNNWGTSELNHHQVELDVPKFKSVQPPSPPLSPSPASPSSYLAFSSAFSPSEFLNSPVFFPSPNTFASSTTEALAGQTFNWRSVSGEEQQRDKEDEKNYSDFSFQTHIQSSSDMFQVEPLKKQDIWKFNEPSEQTDFSSERTATQSEYPSIQSFSSLMASGKPELQSNSVPGSGYFDYANASQAVREQKRSGDGFNWRKYGQKQVKGSENPRSYYKCTHPNCSVKKKVEKSLDGQITEIVYKGHHNHPKPQSTRRTNSQSIHQPSSSCTNSGISDQSVVTLGNPQMDHFSIQEDSSASVGEEEYEQTSQTSYSGGDEDNLAHEAKRWKGDNENDGYSASGSRTVREPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSASYNMNKNSLNSNISAPIRPSAVNCYSSSSGLTNSLYNNTRLPAIGNQESFALDKFKNPESFGHSALTKSMGSYGDHAPYSDAAYSNAKDDRKDDSFLQSFLSKDF 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00825 536 ProSiteProfiles WRKY domain profile. 360 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g00825 536 MobiDBLite consensus disorder prediction 1 15 - -
Spst1g00825 536 Gene3D WRKY domain 352 418 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g00825 536 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 59 441 IPR044810 GO:0003700
Spst1g00825 536 MobiDBLite consensus disorder prediction 257 285 - -
Spst1g00825 536 MobiDBLite consensus disorder prediction 246 285 - -
Spst1g00825 536 SUPERFAMILY WRKY DNA-binding domain 192 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g00825 536 FunFam WRKY transcription factor 33 352 418 - -
Spst1g00825 536 SUPERFAMILY WRKY DNA-binding domain 357 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g00825 536 MobiDBLite consensus disorder prediction 84 104 - -
Spst1g00825 536 Gene3D WRKY domain 182 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g00825 536 MobiDBLite consensus disorder prediction 297 321 - -
Spst1g00825 536 ProSiteProfiles WRKY domain profile. 191 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g00825 536 MobiDBLite consensus disorder prediction 297 323 - -
Spst1g00825 536 MobiDBLite consensus disorder prediction 1 43 - -
Spst1g00825 536 FunFam WRKY transcription factor 185 256 - -
Spst1g00825 536 SMART WRKY_cls 196 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g00825 536 SMART WRKY_cls 365 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g00825 536 Pfam WRKY DNA -binding domain 366 422 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g00825 536 Pfam WRKY DNA -binding domain 198 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00825 Spst-Chr1 10472075 10474528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00825 20 457 WRKY Transcription Factor Family AT2G38470 50.000 2.77e-110 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst1g00825 WRKY 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00825 K13424 - gmx:100776837 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00825 1 10472075 10474528 Spst1g00825 1 10472075 10474528 ECH