Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00783 ATGAACTCAACTCTTGATCAAAGTGCTGAGTCTTATGACTTCACCATGTATGACCATGTTAGTGATTGTGACCCTTACAAATTTACTATGGATGACCATGTTAGTGATTATGGATTCAATACTCTATTAACCACTTTAGAGGATTCCACTTCTGAAATTTGTTTCATCCCCTTTTCTTCCTCTCCCTTCTTATTCTCCAATGATCATATTCATATCCAATACCCAATCATTGAAGAAACCATGCAACTTCCATCACTCATGGAATTGGATGATTTTGGTTTCATCTTGGATATCCAAATGGTTAGTGTTGAAGGTCATGGATGCCAAGGAGAGAGTGAAGGGAACTTCTCCCCTTCACAAAATTTGTCAGGTAAGGTGGAAAATGCTCGGAGTCCTACTCTATCTGTGGGGTCTGAGTTGTCCACAAATAAAACATCACCATTGACTTTACCCCAACAAAACATGGAGATTGAAAACCAAATGGGCCTTCAACACTTGTTGGAGGCCTATGGAGAAGCCTTGGAGCAAGGACAAAAATCACTAGCAGAAGTGATTTTAAGGTGCATGAGCCAAAAAGCTAGTCCACTAGGTGAGTCTCTAGAGCGCCTTGTATTCTACTTGTCTCAGGGGATAACCAATCATGGAGACTATTTCAAAGGAGAGGCCTTCAAGAACTTGAAGGTTGCTTTGAGGACACTTTATCAAGGACTCCCAATTGGAAAAATTGCTCACTTTGCAGCTGTTTCGACAATTTTAGAAGCCATGCCACAAGATTGTTCTGGTATACACTTAGTGGACTTTTATATTGGAGATGGGGTTCAATGGGCTCCAATAATTGAGGCTATTGCACACATGAACAAAACATTAAAATTGACATCAATTGAATGGGGTAGTGAGGATATTGAATGCGTTTCTAGTCCATCAAAATTTGAGGAAACTAAAAGGCAACTCTATGAGTATGCGAAATCCTATGGTTTAAAGTTGAAGGTAGAGGAGAAAGGAGTGGAGGAACTTGTTGCTGATGTTAAGAAAATTAACAAAATGGGTGGGAGGGGTGAGTTTTTGGCTTTCAATTTAATGATCGACCTTCCACATATGGGAAAAGTAAGGAGCAGAAGACAGGCCTTAGAGTTTCTGAGGTTAGCTAATGATTTGATTAACACTTCCAGCAGCAGTGGAATTATAACTTTTGGGGATGGAGGTGCTTATGAGAAAGTGAAAAACAGCTTCAGTTTTAGGTCATTCTTTGAAGGATATATAGTGCATTATCAAGCCTTGTTAGAATCAATTGAATCATATTTTCCAACTGATTTCCCAGAAGCAAAAATTGCCATGGAGCAATTGTTTTTGCAACCTTTTATGTCCTCTCTCGATTGGTTAAACATGGGAAGAGATGCACATGGGTAG 1407 0.3945 MNSTLDQSAESYDFTMYDHVSDCDPYKFTMDDHVSDYGFNTLLTTLEDSTSEICFIPFSSSPFLFSNDHIHIQYPIIEETMQLPSLMELDDFGFILDIQMVSVEGHGCQGESEGNFSPSQNLSGKVENARSPTLSVGSELSTNKTSPLTLPQQNMEIENQMGLQHLLEAYGEALEQGQKSLAEVILRCMSQKASPLGESLERLVFYLSQGITNHGDYFKGEAFKNLKVALRTLYQGLPIGKIAHFAAVSTILEAMPQDCSGIHLVDFYIGDGVQWAPIIEAIAHMNKTLKLTSIEWGSEDIECVSSPSKFEETKRQLYEYAKSYGLKLKVEEKGVEELVADVKKINKMGGRGEFLAFNLMIDLPHMGKVRSRRQALEFLRLANDLINTSSSSGIITFGDGGAYEKVKNSFSFRSFFEGYIVHYQALLESIESYFPTDFPEAKIAMEQLFLQPFMSSLDWLNMGRDAHG 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00783 468 ProSiteProfiles GRAS family profile. 154 468 IPR005202 -
Spst1g00783 468 Pfam GRAS domain family 164 452 IPR005202 -
Spst1g00783 468 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 145 452 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00783 Spst-Chr1 10146665 10148071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00783 182 449 GRAS Transcription Factor Family AT5G66770 25.087 1.28e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst1g00783 GRAS 1.4e-29 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00783 - - gmx:100784347 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00783 1 10146665 10148071 Spst1g00783 1 10146665 10148071 ECH