Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00782 ATGGAAAAGATGATGCAACAAGAGGCTTTGCAATCCCCATGGCCATTACTTGAGGACATGAACTCAACTCTTGATCAAGGTGTTGAGTCTTATGGCTTCACTGTATTTAGTCATGCTAGTGATTATGGACACGAATTCACTATGTATGATCATGTTGGTGATTATGAACTCCATAGTCTATTGAGCACTCTAGAGGATTCCACTACTGAAATTTGTTCCATCCCCTTTTCTTCATCTCCCTTCTTATTTTCCAATGATCATATTCATACCCATTACCCAATCAATGAAGAAACCATCCAACTTCCATCACTCATGGAATTGGATGATTTTGATTCTATCTTAGATTCTCAAATTGTTAGTATTCAAGGTCATGGATACTTAGCAGAGAGTGAAGGGAGCTTTTTCCCTTCACAAAATTTGTCAAGTGAGGTGGAGAATGCTTGGAGTCCTACTCCTTCTATAAGGTCTGAGCTGTCTACAAATCAAGCATCACCATTGACTTTACCTCAAGAAAACATGGAGATTGAAAACCAATTAAGTCTTCAACACTTGTTGGAGGCCTATGGAGAGGCCTTGGAGCAAGGACAAGGATCACTAGCAGAAGTGATTTTGAGGTGCATGAGCCAGAAAGCTAGTCCATTAGGTGAGTCTCTAGAGCGCCTTGTATTCTACATGTCTCAAGGCATGACCAATCATGGAAACTATCTCAAAGGGGAGGCCTTCAAGAACCTTGAGGTTGCTTCGAGGGCACTCTATCAAGGGCTCCCAACTGGGAAAATTGCTCACTTTGCAGCTGTTTCAACAATTCTAGAAGCCATGCCGCAAGATTATTATGGTGTACACTTAGTGGAGTTTAGTATTGGAGATGGGGTTCAATGGGCTCCAATAATTGAGGCTATTGCTCACATGAACAAAACATTGAAATTGACATTAATTAAATGGGGTGATGAGGATCTTGAATGTGTTTCTAGTCCATCACAATTTGAGGAAACCAAAAGGAGACTCTATGAGCATGCCAAATCCTGTGGTTTGAAGTTTAATATAGAGGAGAAAGGAGTGGAGGAACTTGTTGCTGAGATTAAGAAAACGAACAAAATGGGTGGGAGAGGTGAGTTTTTGGCCTTTAATTTAATGACTGGTCTTCCACACATGAGAAGAGTAAGGAGCAGAAGGCAAGTCTTGCAGTTTCTAAGGGTAGCAGAGGATTTGATCAACACCTCTGGCAACAAAGGAATTATAACTTTCGGAGATGGGGGTGCTTATGAGAAAGTAAAAAATAACTCGAATTTCAGATCATTCTTTGAAGGACATTTGGTGCATTACCAGGCATTGTTAGAATCAATTGAATCACATTTCCCAACTCGTTTTATTGAAGCAAAAATTGCCATGGAGCAATTGTTTTTGCAACCTTGTATATCATCTCTTGATTGGTTACAAACATGGGAGGAGATGCACAAGGGTGGGCATGTTGAGGCAAATATTAACTTAAATGGTTGTCAATTAAGCAGAAACATTTTGATGGAAATCAGACAAGTGTTGAGAGGAAGTGAAGGTTTATATGAGGCCAAGATTGAAGGGCAAAATGACAATGAACTAGTTTTGGAGTACAAAGGAACTCAACTATTAAGATTTTCAACTTGGAAAAACTTTAGTTAG 1656 0.3967 MEKMMQQEALQSPWPLLEDMNSTLDQGVESYGFTVFSHASDYGHEFTMYDHVGDYELHSLLSTLEDSTTEICSIPFSSSPFLFSNDHIHTHYPINEETIQLPSLMELDDFDSILDSQIVSIQGHGYLAESEGSFFPSQNLSSEVENAWSPTPSIRSELSTNQASPLTLPQENMEIENQLSLQHLLEAYGEALEQGQGSLAEVILRCMSQKASPLGESLERLVFYMSQGMTNHGNYLKGEAFKNLEVASRALYQGLPTGKIAHFAAVSTILEAMPQDYYGVHLVEFSIGDGVQWAPIIEAIAHMNKTLKLTLIKWGDEDLECVSSPSQFEETKRRLYEHAKSCGLKFNIEEKGVEELVAEIKKTNKMGGRGEFLAFNLMTGLPHMRRVRSRRQVLQFLRVAEDLINTSGNKGIITFGDGGAYEKVKNNSNFRSFFEGHLVHYQALLESIESHFPTRFIEAKIAMEQLFLQPCISSLDWLQTWEEMHKGGHVEANINLNGCQLSRNILMEIRQVLRGSEGLYEAKIEGQNDNELVLEYKGTQLLRFSTWKNFS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00782 551 ProSiteProfiles GRAS family profile. 172 548 IPR005202 -
Spst1g00782 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 159 521 IPR005202 -
Spst1g00782 551 Pfam GRAS domain family 182 548 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00782 Spst-Chr1 10129732 10131387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00782 190 548 GRAS Transcription Factor Family AT4G36710 24.121 6.12e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst1g00782 GRAS 2.7e-33 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00782 - - gmx:100784347 831.247