Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00781 ATGGCTTCTCAAATTCTTCTTGTCTTCCTCCTATCATTCTTTTTCTTACACCAAGAAGCCTCCTCCCAGGTTTTAATCTTTGAAGGATTTGATGAAACGGATGAAATCAACTGTGATGGATCTTCCATCATCAAAGACAGTCGTTTACTTAGACTCACCAACAGATCAACCAATATTATAGGCCATGCATTCTATAAAACACCATTCCAAATGCTTAACAAAACAGACCCTCCTATTCAACCCTATGCTTATTCCTTCAGCACCTACTTCGTTTTCTCAATTGTATCCCCTAATTCTGGCTCTGGGGGCTTTGGCCTTGCCTTCACCATAGCACCCTCAACAGAGTTTCATGGGGCTCAGGCTGGCCATTATCTTGGTCTTTTTAACACCACCAATGATGGGAATGCCTCAAATCACATCTTTGCAGTTGAGTTTGACACAGTAAATCGCTACAACGATGACTCGGACTCTGAAGGGAACCATGTTGGGGTCGATATAAATGGCATGGGCTCAAAGATTACTGAACCAGCTGCATATATTGAAGAAGGTACCGAGAGTGTAAAGGATGACTTTAGAATGGCCAAGGTTGATGCTGTCCAAGCTTGGATAGAGTATGATGGTGAAAAGAGAACTCTCAATGTAACAATAGCTCCTTTAAAATTATCAAGGCCCAGCACACCACTTATTAAGAATTATAAAATTGACCTTTACAATGTTATGAAGGAAAACATGTTTGTTGGTTTCTCAGCATCAACAGGCCAGGAAACAAGCTCTCATTATCTTCTAGGGTGGAGTTTTGCAGTGAATGGTGTTGCCCCTATGCTTTCTAATCTTCCAAAGCCACCACCCAAGGAGCAAGATCCATCCTCATTTCCTTGGGTCAAGGTTGCAATTGGCATCTTGTCTGCTTTGACTCTGAGCCTTTTGTGTCTTCTAATTCTTCTGACATGTTATAACAGATACATGGATTTTGAGGTTCTTGAGGACTGGGAGACGGATTGTCCTCACAGGTTTAGATACAAAGATCTTCACCTTGCCACAAAAGGGTTCATAGAAAGCCAACTCATCGGAATAGGAGGCTTTGGTGCTGTGTACAAAGGTGTCTTACCAACGACAGGAACTGAAGTTGCTGTTAAGAGGATTGTGAGGAGCCCTTTACATGGAATGAGGGAATTTGCAGCTGAGGTTGAAAGCTTAGGAAGATTGAGGCACAAGAATTTGGTGAACCTTCAAGGGTGGTGCAAGAAAAAGAATGATCTCCTCCTAGTCTATGATTTCATTCCTAATGGAAGCCTTGATTGTGTCCTATATAACCCCAATAACAGCTTTGTTTTGAACTGGGGGCAAAGATTCAACATTGTCAGAGGCATCAGTGCTGGACTATTGTACTTGCATGAAGAGTGGGAGCAAGTGGTGATCCATAGAGATGTGAAAACTAGCAATATTTTGATAGATGGGAACTTGAGTGCACGTTTAGGTGACTTTGGACTTGCAAGGCTCTATAACCATGGGCAAGTATCACACACGACCAATGTGGTTGGCACTATTGGCTACATTGCACCTGAGTTAACTCGCACAGGAAAGGCTTCTACCAAAACTGATGTGTATGCATTTGGGGTTGTGCTCCTAGAAGTCGTCACAGGTAAGAGGCCTCTTGATTCAGATCAGTTTTTCTTGGTGGAATGGGTGGTTGAGAATTACCATTTGGGTCAAATTCTTGAGGTCATTGATCCTAAGCTGGATTCAGTTTATAATGAGGAAGAAGTTGAGTTGGTTCTCAAGTTGGGTTTACTATGCTCTCAACATAGAGCAGATTATAGACCTACCATGAAACAAGTTACAAGGTACCTAAACTTTGATGACCCTCTTCCTGATATTGCTGACTGGGGACATGTTGGTTCCAATAGCAGCAGCAGAATGAACTCAGGTTTCTTAGAAATCACGTCATCTTTGAGAACTGCTGAAACATCAGGGTATTCGTCCTCCATTACCATGAGTACCAAGTCCATAGATGCTGGTAGATAG 2025 0.4232 MASQILLVFLLSFFFLHQEASSQVLIFEGFDETDEINCDGSSIIKDSRLLRLTNRSTNIIGHAFYKTPFQMLNKTDPPIQPYAYSFSTYFVFSIVSPNSGSGGFGLAFTIAPSTEFHGAQAGHYLGLFNTTNDGNASNHIFAVEFDTVNRYNDDSDSEGNHVGVDINGMGSKITEPAAYIEEGTESVKDDFRMAKVDAVQAWIEYDGEKRTLNVTIAPLKLSRPSTPLIKNYKIDLYNVMKENMFVGFSASTGQETSSHYLLGWSFAVNGVAPMLSNLPKPPPKEQDPSSFPWVKVAIGILSALTLSLLCLLILLTCYNRYMDFEVLEDWETDCPHRFRYKDLHLATKGFIESQLIGIGGFGAVYKGVLPTTGTEVAVKRIVRSPLHGMREFAAEVESLGRLRHKNLVNLQGWCKKKNDLLLVYDFIPNGSLDCVLYNPNNSFVLNWGQRFNIVRGISAGLLYLHEEWEQVVIHRDVKTSNILIDGNLSARLGDFGLARLYNHGQVSHTTNVVGTIGYIAPELTRTGKASTKTDVYAFGVVLLEVVTGKRPLDSDQFFLVEWVVENYHLGQILEVIDPKLDSVYNEEEVELVLKLGLLCSQHRADYRPTMKQVTRYLNFDDPLPDIADWGHVGSNSSSRMNSGFLEITSSLRTAETSGYSSSITMSTKSIDAGR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00781 674 SMART serkin_6 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00781 674 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524
Spst1g00781 674 Gene3D - 24 269 - -
Spst1g00781 674 PANTHER - 20 619 - -
Spst1g00781 674 FunFam serine/threonine-protein kinase PBS1-like 320 426 - -
Spst1g00781 674 CDD STKc_IRAK 356 618 - -
Spst1g00781 674 Pfam Protein kinase domain 352 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00781 674 Pfam Legume lectin domain 26 276 IPR001220 GO:0030246
Spst1g00781 674 ProSiteProfiles Protein kinase domain profile. 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00781 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Spst1g00781 674 CDD lectin_legume_LecRK_Arcelin_ConA 26 270 IPR001220 GO:0030246
Spst1g00781 674 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Spst1g00781 674 SUPERFAMILY Protein kinase-like (PK-like) 333 620 IPR011009 -
Spst1g00781 674 FunFam L-type lectin-domain containing receptor kinase V.9 21 274 - -
Spst1g00781 674 Gene3D Transferase(Phosphotransferase) domain 1 427 621 - -
Spst1g00781 674 FunFam L-type lectin-domain containing receptor kinase S.4 427 629 - -
Spst1g00781 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 280 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00781 Spst-Chr1 10120659 10122683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00781 19 630 Receptor kinase-like Gene Family AT3G08870 50.478 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst1g00781 Pkinase 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00781 - - gmx:100802724 1117.83