Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00750 ATGGATGATGTAAATGCTGCTTCGTTTGAGGCCTTTCTCCAAGGGTGGATGGTGCGCCAAAGAGACTTCCTTGATGAGCTGAGAGAAGCTCGGCAACAGTATCAGGAGGGGCAGAGAGTTGATATGAGGCCATTGATCGACAGGGTCATCTGCCACTATGGACAATACTTTGAAGAGAAATCAAGGATTGCACACCACAATATTCTTCTTGTTTTCTCACCACCATGGTTCAGTTCATTGGAAAAATCCTTTCTTTGGGTTGGGGGCTTCAAACCTGGACTTGCTTTTCAGGTTGTGAACACAGCTTTGGAGGACATGACAGAAGACCAAAAGAACAGACTAAGTGTTCTGAATCAAGAGACCAAGATGAAGGAAAGAAGCCTCAATGATGAGTTGGCCAAGCTTCAAGAGAGTGTGGCAGATCCTCCGCTGGTGGACATGGCCAGAAGCCAGGGCAGGGTGCGTTATACTTGGCCCTTCCTGAGACCGCAGAGTTCTGTTCCAAACTCTTTCAAAGAGAAATTGGAAAATCTGGTGGCAAATGCAGATGCACTAAGGACAGACACAGCTTTGAGCATTTTGCAGATACTGAGACCTGCTCAGATTGTCACATTCATGGTTTCTGCGGCTGAGCTTCAGGTCAGGGTCAGGTCTTGGGGTTTAGACAAGGATGCCAAGAATGGAGGAGGCCAAGAGTGA 699 0.475 MDDVNAASFEAFLQGWMVRQRDFLDELREARQQYQEGQRVDMRPLIDRVICHYGQYFEEKSRIAHHNILLVFSPPWFSSLEKSFLWVGGFKPGLAFQVVNTALEDMTEDQKNRLSVLNQETKMKERSLNDELAKLQESVADPPLVDMARSQGRVRYTWPFLRPQSSVPNSFKEKLENLVANADALRTDTALSILQILRPAQIVTFMVSAAELQVRVRSWGLDKDAKNGGGQE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00750 232 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 230 - -
Spst1g00750 232 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
Spst1g00750 232 Coils Coil 100 138 - -
Spst1g00750 232 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00750 Spst-Chr1 9741061 9741759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00750 3 218 Calmodulin-binding Proteins AT1G77920 27.315 4.11e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00750 - - vun:114185413 365.54