Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00745 ATGGATGATGGATCATATAATTTTACTGAGGGTCTTCGTTTTTGTTTGTTTGGCCGGGATTGGTACAACAAAGAGAATGCATTACGAGTCAAGAAAGTCGGTGCAATTCTTGGTATGAAAATGACCCATGTCCACGATATTCTCATCTTTGAATCAAGTCAGCAACTTCGGCAGCTCTGTCTTAAAATGGCAGAAACAACATTTACACTTACTAAGCTTAATGGAAATATGTCTCCAATGCACCCAAATTCTAACCCCATTACCAAACAATATGCAACAGAAGTAGTGCATGGTCATAATAAAGATGCAATGATCAATGTAACTAAACCAGGGGTGGTGGCAAGGCTAATGGGGCTTGATTCACTGCCAAGTACCAACTTGGTACCGAGCACAAACACCCCAGATTCAGTTCCAAGAAGTAGGTCAGTGAACTTTGTGGATTACTTGCTCAAGTTTGATACCAGCCAAGCCAACCATCACCAAGTGAAAACCTCAGCATCATTCAGAGAGGTTCCCGCGCCGTTTGATCAGCACAACAACAAAAAGACAAACCGTGACCTTGTTGTGCTCTACTGGGACAGTGGGAGTGAAGATCATAAAGTTGAATCCCTTTTGAGGATTCCAGAAATGGGGTTGGAAGAATCTAGACAGAGAAAGAAGCAGGGGAGCAAGAACAAGGAGATTGTTGGTGTGACAAAGGAAAAGAACCTCATAAAGAGAAAGAAGATTTCCAAGTTCAAGAATGAGCCTAGAGTGGTTCCACTTAAGCACGGTTCAAAGGTTCGAAATCACAATGAAGCTAAAGTTTTGGCACCAGTTTCTGCTTTCTCTAAGAGTTGTAGTAGTAATAGAAGAAAAGGTACTAATGGTCCTAGTGGTTCAAGAACAAGCTCAACATTGCCAAATAAGCAGAAAAAAGTGCTCTCTGAACCAAAACAGTCGAAAAAACCAAGAAAACAACAGTCAACAAAGAAGATAGAGACTGAGTGTAGCTCAGAGAATTTCAGTCCAATCTCAGTCTTAAATGACTACGACTTTTCATTTCTTTATGGACCTGATTTTCCAGATTACACAAGCTCCTTAACGCCGAAGACAGAGTGGGAATTTTCAAGAGAACTGTTCTTGGATGATAATGTTGGAAACAGAGCAAGCAAGGACAAAGAATATTCCTCCCCTGACATCAACAACAAAAAGGAATGTTTATCAGAATTAACAGTGAAGCTTTGCAAGTGTACAGAAAATGATTTGACAGAATCAGATTTCACAAGAAAACACATGTGTGAGGGTGAAAACTACGAAGATATTTGTTGGGAGTATGAGCATAAAATTTTAGACATTTTACTGCACGAGTTTGTCAATGAACTTGTGGAACTTTCATATTGA 1383 0.3984 MDDGSYNFTEGLRFCLFGRDWYNKENALRVKKVGAILGMKMTHVHDILIFESSQQLRQLCLKMAETTFTLTKLNGNMSPMHPNSNPITKQYATEVVHGHNKDAMINVTKPGVVARLMGLDSLPSTNLVPSTNTPDSVPRSRSVNFVDYLLKFDTSQANHHQVKTSASFREVPAPFDQHNNKKTNRDLVVLYWDSGSEDHKVESLLRIPEMGLEESRQRKKQGSKNKEIVGVTKEKNLIKRKKISKFKNEPRVVPLKHGSKVRNHNEAKVLAPVSAFSKSCSSNRRKGTNGPSGSRTSSTLPNKQKKVLSEPKQSKKPRKQQSTKKIETECSSENFSPISVLNDYDFSFLYGPDFPDYTSSLTPKTEWEFSRELFLDDNVGNRASKDKEYSSPDINNKKECLSELTVKLCKCTENDLTESDFTRKHMCEGENYEDICWEYEHKILDILLHEFVNELVELSY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00745 460 MobiDBLite consensus disorder prediction 213 237 - -
Spst1g00745 460 PANTHER OS05G0128300 PROTEIN 78 459 - -
Spst1g00745 460 MobiDBLite consensus disorder prediction 308 326 - -
Spst1g00745 460 MobiDBLite consensus disorder prediction 247 264 - -
Spst1g00745 460 MobiDBLite consensus disorder prediction 275 307 - -
Spst1g00745 460 MobiDBLite consensus disorder prediction 213 328 - -
Spst1g00745 460 Pfam DUF761-associated sequence motif 110 126 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00745 Spst-Chr1 9703513 9710212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00745 112 455 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 25.936 7.11e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00745 - - gmx:100775965 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00745 1 9703513 9710212 Spst1g00745 1 9703513 9710212 ECH