Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00744 ATGGAAGTGCAATGTGTCGCGTTTTTATTAGTCGAAAGGGACGAGCAACATCAGCATCACCACCCTCACAACATCACAACCAGCGCTAACGTGGATGCCACAGATAGGTTCCCCCAATGGAGCATCCAGGAGACAAAAGAGTTCCTCGTGATCCGTGCGGAGCTGGATCAGACCTTCATGGAGACAAAGCGGAATAAACAGCTTTGGGAAGTCATCTCCAACCGGATGAAAGAAAAGGGTTTCCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTATAAGGGATGTGAAGCGATGGAGCCAGAGGCGATGAGGCAGCAATTCCCGTTTTACAATGAGCTTCAAGGGATTTTCACATCAAGGATGCAGAGAATGTTGTGGGCAGAAGCAGAAGGAGGGTCGAAGAAGAAAGGAGTGCACCTTTCATCAGAGGATGAGGAAGAGGGAAATGAAGAAAGTGAGGGAGATCAGAAGGGTAGCATAATGAAAAAGAAGAAGAAGGGGAAGATGGTAATTGGAGGAGGGAGTGGTAGCAGTAGCAATGTGGAGAGTTTGAAGGAGATCATGGAGGAGTTCCTGAGGCAACAGATGCAGATGGAGGCACAGTGGATGGAAGCGTTTGAGGCAAGGGAGAATGAGAGGAGGATGAAGGAGATGGAGTGGAGGCAAACCATGGAGGCATTGGAGAATGAGAGGATGATGATGGACCAAAAATGGAGAGAGAGGGAAGAGCAAAGAAGGATCAGGGAAGAAGTTAGGGCTGACAAAAGAGATGCTCTAATCACAGCTCTTCTGAACAAGCTCAGAAGAGAAGAGATGTAG 840 0.481 MEVQCVAFLLVERDEQHQHHHPHNITTSANVDATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGFHRSAEQCKCKWKNLVTRYKGCEAMEPEAMRQQFPFYNELQGIFTSRMQRMLWAEAEGGSKKKGVHLSSEDEEEGNEESEGDQKGSIMKKKKKGKMVIGGGSGSSSNVESLKEIMEEFLRQQMQMEAQWMEAFEARENERRMKEMEWRQTMEALENERMMMDQKWREREEQRRIREEVRADKRDALITALLNKLRREEM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00744 279 PANTHER FI21293P1 16 275 - -
Spst1g00744 279 CDD GT1 38 103 - -
Spst1g00744 279 Gene3D - 40 101 - -
Spst1g00744 279 Coils Coil 188 208 - -
Spst1g00744 279 FunFam Zinc finger and SCAN domain-containing 20 40 101 - -
Spst1g00744 279 ProSiteProfiles Myb-like domain profile. 40 96 IPR001005 -
Spst1g00744 279 Pfam Myb/SANT-like DNA-binding domain 39 121 IPR044822 -
Spst1g00744 279 MobiDBLite consensus disorder prediction 139 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00744 Spst-Chr1 9691036 9694997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00744 14 277 Trihelix Transcription Factor Family AT2G38250 52.518 3.06e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst1g00744 Myb_DNA-bind_4 2.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00744 - - gmx:100794230 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00744 1 9691036 9694997 Spst1g00744 1 9691036 9694997 ECH