Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00743 ATGGGAAACTGCTGCAGATCCCCGGCCGCCGTAGCCCGAGAGGACGTCAAATCGAGCTTCTCCAACGCCGACCACCACGGCAAGCGCGGTGCCGGAGCAGAAGCCGTCAAACAGAAGGCGCCGATCACGGTCCTTGCCGGCGTGCCCAAGGAGAACATCGAGGACCGCTACCTCGTCGACCGAGAGCTCGGCCGCGGCGAGTTCGGGGTGACTTACCTCTGTATCGACCGCGACACTCGCGAACTGCTAGCTTGCAAGAGCATCTCCAAGCGGAAGCTCAGGACTGCCGTCGACGTCGAGGACGTGCGCCGCGAGGTCGCCATCATGCGCCACCTGCCGGAGAGCCCTAGCATCGTGTCGCTCCGCGAGGCCTGCGAGGACGACAATGCCGTCCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCTTCGACCGGATCGTTGCCCGCGGCCACTACACCGAGCGCGCTGCTGCCGCTGTCACGAGGACGATTGTGGAGGTGGTGCAGCTCTGCCACAAGCACGGGGTCATCCATCGCGACCTGAAACCGGAGAATTTCTTGTTTGCAAACAAGAAGGAGAATTCGCCGCTCAAGGCTATTGACTTCGGGCTTTCCATATTTTTCAAGCCAGAAATCAAATTAGAGTCACTTCTTCCCACTCACTTCTTCTGTAGCATTGGTGATTCACCTCTGCTTGTGGTGTTTCTAGATTCATCGATAATTTATGGTTCTCTTGATTACCTCTGGGTATTGCTGACTGGTGATTGGCTTGGTGTAATTTCTGGAAATGAAAATGGTGATTGGCCGGAGCTCTGGCGGAGGAAACTTGTCATTGCTAACTGCATTTGGGTGGCCAGTGGCGTCAATTTTGGGAATGCTAGAGTGGCAAGACCTTGGGACTTCCCATGCAATTATATCTGGCAATCTTGTAAGGAAGCTGCTGATGAGATGAGAAAGGCCAGAGACTCCAGAAACCATCCCATTATGTTGCTTGATGCTTATGCTGCACTGCTGCTTCCTTTACTCATCGTTGAAGGTCCACCATCTAAGATAAGGAGAGGGCCTTGTTCTTTTCATATTTTCAAAAGAAGTGAGAGGTTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCAGAAGTTCTCAAGCGGAATTATGGACCAGAAATAGATATATGGAGTGCAGGAGTAATTCTCTACATCTTACTGTGTGGTGTTCCCCCATTTTGGGCTGAATCTGAGCAAGGAGTTGCACAGGCCATTCTTCGAGGGCTTATAGATTTCAAAAGAGAGCCTTGGCCCAGTATTTCTGAAAGTGCTAAAAGTCTTGTTAAGCAAATGTTAGAACCAGACCCTAAGCTTCGATTAACTGCCAAACAAGTGCTTGAGCATCCCTGGCTCCAAAATGCTAAGAAGGCTCCTAATGTTCCACTTGGAGATGTTGTCAAGTCAAGGCTTAAGCAATTTTCAATGATGAACAGATTCAAAAGAAAAGCCCTTAGGGTCATTGCTGATTTCTTATCCAATGAAGAAGTTGAAGACATTAAAGATATGTTCAAAAAGATGGATAATGATAATGATGGCATTGTTTCCATTGAAGAACTTAAAGCTGGATTTCGAAACTTTGGGTCTCAACTTGCTGAGTCTGAAGTTCAGTTGCTTATTGAAGCTGTAGATAGTAATGGTAAGGGAACACTAGACTACGGGGAATTTGTCGCTGTTTCCCTTCATTTAAAAAGGATGGCTAATGACGAGCATCTTCGCAAGGCCTTCTCCTATTTTGATAAAGATGGGAATGGATATATTGAACCTGATGAGCTACGTAATGCCTTGATGGAAGATGGAGCAGATGATTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTAGACACGGACAAGGATGGACGTATCAGCTACGATGAATTTGTTGCGATGATGAAAACTGGAACGGATTGGAGAAAAGCATCAAGGCATTATTCACGTGGGAGATTCAATAGCTTGAGCTTAAAGTTGATGAAAGACGAGGGTTCCTTTCCACTTGGTGCTGTGCGAGTTACGAAGGATTGGGTACGCCAATTATACACGCACTTTGTTACTTGTGTAAAACATGGTGCCTTGGAGCCACTGGTATATGGAACTTGTGTAAAACATGGAACCGTTGCCGTCGTTGAATTTGTGCGTACACTGTTTTGGCTGCTGTGTAGGGATAGGTTTGAATATGTAGGAAGTACAAGTGGCAGGAGAGGCATATCTAAAGATTTGAGTCTTGGACCTATGGACCTTCAGGTATTTGATTCATAG 2307 0.4751 MGNCCRSPAAVAREDVKSSFSNADHHGKRGAGAEAVKQKAPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDVEDVRREVAIMRHLPESPSIVSLREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPEIKLESLLPTHFFCSIGDSPLLVVFLDSSIIYGSLDYLWVLLTGDWLGVISGNENGDWPELWRRKLVIANCIWVASGVNFGNARVARPWDFPCNYIWQSCKEAADEMRKARDSRNHPIMLLDAYAALLLPLLIVEGPPSKIRRGPCSFHIFKRSERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVKQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKDMFKKMDNDNDGIVSIEELKAGFRNFGSQLAESEVQLLIEAVDSNGKGTLDYGEFVAVSLHLKRMANDEHLRKAFSYFDKDGNGYIEPDELRNALMEDGADDCTDVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDEGSFPLGAVRVTKDWVRQLYTHFVTCVKHGALEPLVYGTCVKHGTVAVVEFVRTLFWLLCRDRFEYVGSTSGRRGISKDLSLGPMDLQVFDS 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00743 768 ProSitePatterns EF-hand calcium-binding domain. 524 536 IPR018247 -
Spst1g00743 768 ProSitePatterns EF-hand calcium-binding domain. 632 644 IPR018247 -
Spst1g00743 768 Gene3D Transferase(Phosphotransferase) domain 1 331 478 - -
Spst1g00743 768 Gene3D Transferase(Phosphotransferase) domain 1 143 230 - -
Spst1g00743 768 FunFam Calcium-dependent protein kinase 1 59 142 - -
Spst1g00743 768 SUPERFAMILY EF-hand 497 674 IPR011992 -
Spst1g00743 768 CDD EFh 587 649 IPR002048 GO:0005509
Spst1g00743 768 CDD STKc_CAMK 56 467 - -
Spst1g00743 768 SMART efh_1 551 579 IPR002048 GO:0005509
Spst1g00743 768 SMART efh_1 587 615 IPR002048 GO:0005509
Spst1g00743 768 SMART efh_1 515 543 IPR002048 GO:0005509
Spst1g00743 768 SMART efh_1 623 651 IPR002048 GO:0005509
Spst1g00743 768 SMART serkin_6 57 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00743 768 Pfam EF-hand domain pair 586 649 IPR002048 GO:0005509
Spst1g00743 768 Pfam EF-hand domain pair 514 574 IPR002048 GO:0005509
Spst1g00743 768 ProSiteProfiles EF-hand calcium-binding domain profile. 619 654 IPR002048 GO:0005509
Spst1g00743 768 ProSiteProfiles EF-hand calcium-binding domain profile. 583 618 IPR002048 GO:0005509
Spst1g00743 768 ProSitePatterns EF-hand calcium-binding domain. 596 608 IPR018247 -
Spst1g00743 768 SUPERFAMILY Protein kinase-like (PK-like) 47 493 IPR011009 -
Spst1g00743 768 ProSiteProfiles Protein kinase domain profile. 57 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00743 768 PANTHER SERINE/THREONINE-PROTEIN KINASE 50 644 - -
Spst1g00743 768 FunFam Calcium-dependent protein kinase 7 477 652 - -
Spst1g00743 768 MobiDBLite consensus disorder prediction 16 35 - -
Spst1g00743 768 Gene3D Phosphorylase Kinase; domain 1 58 142 - -
Spst1g00743 768 Pfam Protein kinase domain 59 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00743 768 Pfam Protein kinase domain 362 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00743 768 MobiDBLite consensus disorder prediction 18 33 - -
Spst1g00743 768 FunFam Calcium-dependent protein kinase SK5 378 473 - -
Spst1g00743 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Spst1g00743 768 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Spst1g00743 768 ProSiteProfiles EF-hand calcium-binding domain profile. 547 582 IPR002048 GO:0005509
Spst1g00743 768 ProSiteProfiles EF-hand calcium-binding domain profile. 511 546 IPR002048 GO:0005509
Spst1g00743 768 Gene3D - 479 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00743 Spst-Chr1 9651487 9664748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00743 361 682 EF-hand Containing Proteins AT1G74740 72.360 9.33e-165 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst1g00743 Pkinase 7.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00743 K13412 - gmx:100793170 612.453