Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00730 ATGGGTTCTCACCAACTAGAACCATGGCTATTGGAGAACGGGAACCCGAAGGTGTTGACAAGGGAGATGAGGCATGGCCGCACTGCACACAGCAAATCCTCCAACTCCCTTCGCAAGAAGTCTGATCGCACTCTTGTCTCCAAGGTTCCTTGTGCTACTCTCAGAAACGTGCTTCTCAACTTGCAAGAGGTTACTCTTGGCACCAAGCTTTCCATTCTCATTCCTGCCATTCCTGCTGCCATCATTGCTGAGTGCTATGGCCTTGGAAGACCTTGGGTTTTTATGTTGAGCCTACTTGGACTTATCCCACTTGCTGAACGTGTGAGCTTCATCACAGAGTAA 342 0.4942 MGSHQLEPWLLENGNPKVLTREMRHGRTAHSKSSNSLRKKSDRTLVSKVPCATLRNVLLNLQEVTLGTKLSILIPAIPAAIIAECYGLGRPWVFMLSLLGLIPLAERVSFITE 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00730 113 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 113 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00730 Spst-Chr1 9408251 9409074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00730 1 113 Antiporters AT3G51860 63.866 2.40e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00730 K07300 - gmx:100816231 187.578