Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00729 ATGTTTCATATGTTCTCAATTACAGTTGGAGGACTTCTGAACGCCACATGTGGGAATATTACTGAGCTCGTAATAGCAATATTTGCCCTTAGCTCTAACAAAGTTGCTGTGGTCAAGTATTCTCTGTTGGGTTCTATTCTTTCAAACCTTCTTCTGGTTCTTGGGACCTCTCTATTATGTGGTGGCATTGCTAACCTTGGAGTGGAACAAAAATATGATAGAAGACAAGGAGATGTGAACTCACTCATGCTGTTGTTGGGATTATTGTGCTACTTACTTCCAGTGCTGTACAAATATAGCGCCGCCTCAGCTGCTCTCACTGTTGATCCTTCACTCCACTTGTCAAGAGCTTCTAGCATTGTCATGCTGATTGCATATGTTGTTTACATTATCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCTGAAGATGAGGATACAGATGAGAACAATGGTTCAGATGAACAACCTGTCATTGGACTGTGGAGTGCCATTGCTTGGCTGATTGGGATGACTGTATTCATTGCTTTGTTGTCTGAATATGTGGTGGATACAATTGAGGATGCATCCGATTCATGGGGTTTGTCTGTGAGCTTCCTCAGCTTAATCTTGCTACCAATAGTTGGAAATGCAGCTGAACATGCTGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATCTCATTGGGTGTTGCATTGGGTTCAGCAACTCAGATTGCCATGTTTGTGGTCCCTTTATGTGTGATCGTTGCTTGGATAATGGGTATCAAAATGGATTTGAACTTCAACCTCTTAGAGACTGGTTCCGTTGCTTTGGCAGTAATAGTCACAAGCTTCACTTTACAGGATGGTACTTCTCACTACATGAAAGGCCTTGTTCTCCTGTTGTGCTACATAGTTATTGGGGCTTGCTTCTTCGTACAAAGAACACCCTTTAACCAAGCTGATGTTACAAACGTCATGCTTAAACCAGACACTAATGCAGTTTTCAGCGCCTAG 1005 0.4219 MFHMFSITVGGLLNATCGNITELVIAIFALSSNKVAVVKYSLLGSILSNLLLVLGTSLLCGGIANLGVEQKYDRRQGDVNSLMLLLGLLCYLLPVLYKYSAASAALTVDPSLHLSRASSIVMLIAYVVYIIFQLWTHRQLFEAEDEDTDENNGSDEQPVIGLWSAIAWLIGMTVFIALLSEYVVDTIEDASDSWGLSVSFLSLILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAMFVVPLCVIVAWIMGIKMDLNFNLLETGSVALAVIVTSFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPFNQADVTNVMLKPDTNAVFSA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00729 334 Gene3D - 152 309 IPR044880 -
Spst1g00729 334 Gene3D - 6 147 IPR044880 -
Spst1g00729 334 FunFam Vacuolar cation/proton exchanger 153 309 - -
Spst1g00729 334 NCBIfam calcium/proton exchanger 8 308 IPR004798 GO:0006816|GO:0015369
Spst1g00729 334 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 5 313 IPR004713 GO:0006812|GO:0008324|GO:0016020
Spst1g00729 334 FunFam Vacuolar cation/proton exchanger 7 151 - -
Spst1g00729 334 NCBIfam calcium/proton exchanger 8 308 - -
Spst1g00729 334 Pfam Sodium/calcium exchanger protein 8 135 IPR004837 GO:0016020|GO:0055085
Spst1g00729 334 Pfam Sodium/calcium exchanger protein 165 303 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00729 Spst-Chr1 9406150 9407848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00729 8 316 Antiporters AT2G38170 69.968 6.44e-147 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00729 K07300 - gmx:100816231 546.584