Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00713 ATGGCATTTATGATCTTGAGAAGGTTCCAATTAAGTCTAGAAGATTGGTTGCATCCTCCAAGCAATGTGCTTCTTGACAATGATATGGTTGCCCATGTTGGTGACTTTGGATTAGCTATATTTTTGTTTGAAGAATCAGGCAAGTTATTCACACAACAAGTTATGTCAGCTAACCTAAGGGGTTCTATTGGCTTCATCCCTCCAGAGTATGGTATGGGTGGGAAGCCTTCTACAATTGGAGATATATATAGCTATGGGATTCTATTACTGGAGATTTTCACCGGAAAAAGACTAACAGATGAAGCATTTGAAGTCTCTGAACAAGAATTGGATGGCGAAAATAAAGAATTTCAAAGTGAAGAGAAAGCTATAAGGAGGAACTATGAGATTGAAGTCACGGCTGCAAGTTTGATGAAGGATTGCTTTGTGTATCTGATGCAAATTGGAATGTCTTTTGCTGCAAATCCCCCTAGTGAACGAATGCGAATCACTGTGGTCATCAACAAACTACATACTATCAAGTACATTTATACAAATAAAGCATAG 546 0.381 MAFMILRRFQLSLEDWLHPPSNVLLDNDMVAHVGDFGLAIFLFEESGKLFTQQVMSANLRGSIGFIPPEYGMGGKPSTIGDIYSYGILLLEIFTGKRLTDEAFEVSEQELDGENKEFQSEEKAIRRNYEIEVTAASLMKDCFVYLMQIGMSFAANPPSERMRITVVINKLHTIKYIYTNKA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00713 181 SUPERFAMILY Protein kinase-like (PK-like) 20 175 IPR011009 -
Spst1g00713 181 Pfam Protein kinase domain 20 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00713 181 Gene3D Transferase(Phosphotransferase) domain 1 17 180 - -
Spst1g00713 181 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00713 181 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 20 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00713 Spst-Chr1 9268046 9268874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00713 20 174 Receptor kinase-like Gene Family AT3G47580 41.250 1.30e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst1g00713 Pkinase 2.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00713 - - gmx:106794146 234.187