Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g00702 | ATGTCTTCCCACCATGGTTTGCCTCCTCTCCTCTTTCCATTGCACGAGTGGATTGCAGATATCCATTCACTGGATAGTGGTTATTCACCAAACACAAGCCTAAGCTTACAACAAAGCCAAAGTGTAGTTAAACTTGCATTGAAAATGGAGGAGGGAGATGAGGATGTGAGAGTAGGAGCAGACAGGTATGCAGAGAGGCAACCAATAGGAACAGGTGCACAGACACAAGATGGGAAAGACTACATAGAGGCACCCCCAGCTCCATTGTTAGAGCATAGAGAGTTAACATCATGGTCTTTCTACAGAGCAGGGATAGCAGAATTTGTGGCCACATTCTTGTTTCTTTATGTCACTGTTTTGACTGTGATGGGTGTGGCAAAATCTCCCAACAAGTGCTCCACAGTTGGCGTCCAGGGCATTGCTTGGTCATTTGGGGGAATGATCTTTGCCCTTGTCTATTGCACTGCTGGTATCTCAGGGGGTCACATTAACCCAGCTGTGACATTTGGGTTGTTCTTGGCACGCAAGTTATCTCTCACTAGGACAGTGTTCTACATGATCATGCAGTGCTTGGGAGCTATATGTGGTGCTGCTGTGGTCAAGGGATTCCAATCAAACCAATATGAGAGGCTTGGTGGTGGTGCCAACATTCTCAGTAAAGGATACTCCAAAGGGGATGGCCTTGGAGCAGAAATTGTTGGCACATTCATTCTAGTTTACACTGTTTTCTCTGCCACAGATGCCAAGCGAAATGCTAGAGACTCGCATGTTCCTATTTTGGCACCTTTGCCGATCGGTTGTGCTGTGTTTCTGGTGCACATGGCTACCATTCCTATCACAGGAACTGGGATCAACCCTGCTAGAAGTTTAGGTACAGCACTTGTATACAACGAGGACCAAGCTTGGGATAACCACTGGATCTTCTGGGTTGGTCCTTTTATTGGGGCAGCACTTGCAGCTTTATACCATCAGATAGTGCTCAGGGCCATTCCTTTTACATCAAAGTGA | 1008 | 0.4663 | MSSHHGLPPLLFPLHEWIADIHSLDSGYSPNTSLSLQQSQSVVKLALKMEEGDEDVRVGADRYAERQPIGTGAQTQDGKDYIEAPPAPLLEHRELTSWSFYRAGIAEFVATFLFLYVTVLTVMGVAKSPNKCSTVGVQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRTVFYMIMQCLGAICGAAVVKGFQSNQYERLGGGANILSKGYSKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGCAVFLVHMATIPITGTGINPARSLGTALVYNEDQAWDNHWIFWVGPFIGAALAALYHQIVLRAIPFTSK | 335 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g00702 | 335 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 62 | 331 | IPR034294 | - | |
Spst1g00702 | 335 | ProSitePatterns | MIP family signature. | 162 | 170 | IPR022357 | - | |
Spst1g00702 | 335 | SUPERFAMILY | Aquaporin-like | 92 | 327 | IPR023271 | - | |
Spst1g00702 | 335 | Pfam | Major intrinsic protein | 94 | 323 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Spst1g00702 | 335 | FunFam | Probable aquaporin PIP1-2 | 87 | 335 | - | - | |
Spst1g00702 | 335 | PRINTS | Major intrinsic protein family signature | 181 | 200 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Spst1g00702 | 335 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Spst1g00702 | 335 | PRINTS | Major intrinsic protein family signature | 144 | 168 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Spst1g00702 | 335 | PRINTS | Major intrinsic protein family signature | 266 | 288 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Spst1g00702 | 335 | PRINTS | Major intrinsic protein family signature | 306 | 326 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Spst1g00702 | 335 | PRINTS | Major intrinsic protein family signature | 230 | 248 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Spst1g00702 | 335 | Gene3D | Glycerol uptake facilitator protein. | 87 | 332 | IPR023271 | - | |
Spst1g00702 | 335 | CDD | MIP | 102 | 326 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Spst1g00702 | 335 | NCBIfam | MIP family channel protein | 106 | 323 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g00702 | Spst-Chr1 | 9188151 | 9193111 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g00702 | 49 | 335 | Major Intrinsic Protein MIP | AT4G23400 | 80.139 | 7.84e-168 | 467 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g00702 | K09872 | - | gmx:100809467 | 546.199 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst1g00702 | 1 | 9188151 | 9193111 | Spst4g01298 | 4 | 49619883 | 49622032 | PCT |