Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00644 ATGTATATGTCTCCAGGCCAAGACATGCCCTCCGTTAATGGCACCACAGACAATATGCCGAGGATGATGCAGATGAGTTTCTACTGGGGCACGGATGCCATAGTGCTTTTCCGTGGGTGGCCAGACCACGTTGTTGGCATGTACATCTTAGCCATTTTATTTGTGTTTTTATTAGCCATGGCTACTGAGGTTTTATCAAACCAACCACTCATTAAACCTGGGACAAGTCCCTTTGTGGGAGGACTCATTCAATCTATTGTTCACCTTTTTCGCATTAGCTTTGTTTACATGGTGATGCTTGCTGTGATGTCCTTCAATGGGGGAATATTCATAGCTGCTGTGTTTGGCCACACCTTGGGATTCTTCATCGCCAAGTTTCGTGCTCTTGCCCTCGCCAATAAGGAAGACGACAAAAGGGCTTCCTCCGTTAGAAACAATGTTTGA 444 0.4572 MYMSPGQDMPSVNGTTDNMPRMMQMSFYWGTDAIVLFRGWPDHVVGMYILAILFVFLLAMATEVLSNQPLIKPGTSPFVGGLIQSIVHLFRISFVYMVMLAVMSFNGGIFIAAVFGHTLGFFIAKFRALALANKEDDKRASSVRNNV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00644 147 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 15 134 IPR007274 GO:0005375|GO:0016020|GO:0035434
Spst1g00644 147 Pfam Ctr copper transporter family 78 123 IPR007274 GO:0005375|GO:0016020|GO:0035434
Spst1g00644 147 Pfam Ctr copper transporter family 25 66 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00644 Spst-Chr1 8443302 8443745 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00644 26 143 Inorganic Solute Cotransporters AT5G59030 42.975 7.14e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00644 K14686 - gmx:100527849 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00644 1 8443302 8443745 Spst1g00644 1 8443302 8443745 ECH