Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00638 ATGGCTTCAAATCAGGAAGAGGTGACCCTTTTGGGGGTTATTGGAAGCCCGTTTGTTTGCAGGGTGAAGATAGCCCTAAAGTTGAAGGGAGTTGAATACAATTACGTGGAAGAAAATTTGGCCAACAAAAGTGAACTGCTGCTCAAATACAACCCTGTTCACAAGAAAGTTCCAGTCTTTGTGCACAATGGGAAGCCCTTAGCAGAGTCTCTTATCATTGTTGAGTACATTGATGAGACATGGAAAAACAACCCCATCTTGCCTTCTGATTCTTACCAAAGAGCCCTGGCTCGTTTTTGGTCCAAAGTCATAGATGACAAGATTGTGGGTGCTTCATGGAAATCTGTTTTCACGGTTGATGAGAAAGAGCGTGAGAAGAATGTTGCAGAAACACATGAGGCTCTGGAGTTTCTTGAGAATGAGATAAAGGATAAGAAGTTCTTTGGAGGAGAGGAGCTGGGGTTGGTAGATATTGCTGCTGTCTATGTTGCATTTTGGATCCCTTTGGTTCAAGAAATAGCAGGGTTGGAGTTATTAACGAGTGAGAAATTTCCTAATCTCTACAAGTGGAGCCAAGAATTTGTGAACCATCCAATCGTCAAAGAAAGCCTTCCCCCTAGAGACCCAGTTTTTGCCTTTTTCAAAGGACGCTATGAAAGCCTTTTTGCTTCAAAATAG 678 0.4248 MASNQEEVTLLGVIGSPFVCRVKIALKLKGVEYNYVEENLANKSELLLKYNPVHKKVPVFVHNGKPLAESLIIVEYIDETWKNNPILPSDSYQRALARFWSKVIDDKIVGASWKSVFTVDEKEREKNVAETHEALEFLENEIKDKKFFGGEELGLVDIAAVYVAFWIPLVQEIAGLELLTSEKFPNLYKWSQEFVNHPIVKESLPPRDPVFAFFKGRYESLFASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00638 225 Coils Coil 121 141 - -
Spst1g00638 225 Pfam Glutathione S-transferase, C-terminal domain 101 198 IPR004046 -
Spst1g00638 225 FunFam Tau class glutathione S-transferase 1 89 - -
Spst1g00638 225 CDD GST_N_Tau 8 81 - -
Spst1g00638 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Spst1g00638 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Spst1g00638 225 Gene3D - 90 225 - -
Spst1g00638 225 SFLD Main (cytGST) 4 221 - -
Spst1g00638 225 FunFam Tau class glutathione S-transferase 87 224 - -
Spst1g00638 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Spst1g00638 225 SFLD Main.3: Omega- and Tau-like 4 221 IPR045073 -
Spst1g00638 225 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Spst1g00638 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 209 IPR045073 -
Spst1g00638 225 CDD GST_C_Tau 92 217 IPR045074 GO:0004364|GO:0006749
Spst1g00638 225 Gene3D Glutaredoxin 1 89 - -
Spst1g00638 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00638 Spst-Chr1 8349814 8350697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00638 4 224 Glutathione S-transferase Gene Family AT3G09270 50.893 1.23e-78 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00638 K00799 - gmx:100500052 412.535