Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00636 ATGGCTACAAATCAGGAAGAGGTGCAGCTTCTGGGAGTTGTGGGAAGCCCGTTCGTGTGTAGGGTGCAGATTGCTCTCAAATTGAAGGGAGTTGAATACAAATTTTTGGAAGAAAATTTAGCCAACAAGAGTGATCTGCTTCTCAAATACAACCCAGTTCACAAGAAGGTTCCAGTTTTTGTTCACAACGAGAAGCCCATTGCAGAGTCTCTTGTGATTGTTGAGTACATTGATCAGACATGGAATAACAACCCCATCTTGCCTTCTGATCCTTACCAAAGAGCCTTGGCTCGTTTCTGGTCCAAATTCATCGATGACAAGGTTGTGGGTGCTGCATCGAAATCTGTTTTCACTGTTGATGAGAAAGAGCGTGAGAAGAATGTGCAAGAAACATTGGAGGGTCTGCAGTTTCTAGAGAATGAGATAAAGGAGAAGAAGTTCTTTGGAGGAGAGGAGATTGGGTTGGCAGATATTGCCGGTTCCTTCGTAGCATTTTGGATTCCAATTGTTCAAGAAATAGCAGGTTTGCAGTTATTCACCAGTGAGAAATTTCCTAATCTCTACAAATGGAGCCAAGAGTTCATCAACCACCCTGTTGTGAAGGAAGTTCTTCCTCCCAGGGAACCACTGTTTACCTTCTTCAAAGCCCGCTATGAAACCCTTACTGCCTCAAAATAG 678 0.4351 MATNQEEVQLLGVVGSPFVCRVQIALKLKGVEYKFLEENLANKSDLLLKYNPVHKKVPVFVHNEKPIAESLVIVEYIDQTWNNNPILPSDPYQRALARFWSKFIDDKVVGAASKSVFTVDEKEREKNVQETLEGLQFLENEIKEKKFFGGEEIGLADIAGSFVAFWIPIVQEIAGLQLFTSEKFPNLYKWSQEFINHPVVKEVLPPREPLFTFFKARYETLTASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00636 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Spst1g00636 225 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Spst1g00636 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Spst1g00636 225 CDD GST_N_Tau 8 81 - -
Spst1g00636 225 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Spst1g00636 225 FunFam Tau class glutathione S-transferase 1 89 - -
Spst1g00636 225 SFLD Main.3: Omega- and Tau-like 4 223 IPR045073 -
Spst1g00636 225 FunFam Tau class glutathione S-transferase 87 224 - -
Spst1g00636 225 SFLD Glutathione Transferase (cytosolic) 4 223 IPR040079 -
Spst1g00636 225 Pfam Glutathione S-transferase, C-terminal domain 115 198 IPR004046 -
Spst1g00636 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 208 IPR045073 -
Spst1g00636 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Spst1g00636 225 Gene3D - 90 225 - -
Spst1g00636 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Spst1g00636 225 Gene3D Glutaredoxin 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00636 Spst-Chr1 8335825 8336812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00636 4 224 Glutathione S-transferase Gene Family AT3G09270 52.679 5.68e-83 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00636 K00799 - gmx:100527851 392.119