Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00615 ATGGTTCCATTAAGCACTTTCATGGACCAACTTAACATCATTACAATGCTAATATTTACAACTATGGCATTGTTGCTATCACGCGCCGAGGCCATGCGAAAATGCGGGAATTGCGGTCCGAACCCGGTTCCTTACCCATTAAGCACGGGATCCGACTGTGGCGACCCGTCGTACAAGATCCGGTGCACCGCGGGTACACTCTGGTTCGATGCACTGGCGGGATCTTCCTACGTGATCAAGTCCATTGACCCGCTTAACCGTCTGATCATACTCCAACCCGCCACGCTGGCTCCAAAGACGTGCGTGTCCACGGACTTCCGCAGCGAAGGCATGCACCTGAACGAGACCCTTCCTTTTAGCGTGGCTTCGAGGAACACCGTTTTTCTCTTCAACTGCACCGCCCACGCGCCTTCGATGAGCTGCTCCGCTAGCAGCGCGTGCCGCAGCTATATTAAGGAGCATGCAGATTTCAGCGCGTGCTGGAGCGTGGGAACGTGCTGTGAGTACCGGAGCGGTGGAGCCCGCAAAGAGTACGCGGTTCGCGTACACGGCAGAGATTGCACGGCGTATGAGAGTTTTGTGGATTTTAACGTGACGGCGGCAACCTTGGGGAAGAGGTGGCCGGAGGGTGGGGTGGGGATCGAATGGGTGGCACCACAGGAACCGGTTTGTAAGGAAGCAATAGATTGCAAAGAATTTCTGAGCTCGAAGTGTGGAGTGGGCCCCAGTGGTGGGGTGCAAAGGTGCTTGTGCGATGCTGGGTTTAAGTGGGACCCGATCAATGCTTCGTGTCAACCTCAAACTCAAACTCAGACACAGAGTAGAAAGTGCACGGGACATGGGAAAGACAGCCACTGCAAAGTTCGGAAGAAAAAGAAAATGCTTCTGGCTGTGGTTGTTTCCTTCGGAGGAATGATCTTTGTTGTAGCAGTCATAGGAGTCATTTTCTACAAGAAGCGTAACCAAGCAAAAAGAAAAACAAAAACAAAGGAGGCTAAAATCAGTAAGAGAAAAGAAATATCAAGTGTCAAAGCCAGTGCTTTATCATCCAGAATCTTCACTGGCAGAGAGATTAGAAAAGCAACCAACAATTTCTCCCAAGAAAACCTCGTTGGCACTGGTGGCTTCGGGGAAGTCTTCAAGGGAACATTCGACGATGGAACCGTCTTTGCCATCAAGCGTGCTAAGCTTGGATGCAACAAAGGCATTGATCAGATGCAAAATGAGGTTCGAATTCTGTGCCAAGTAAACCACAGAAGCTTGGTGAGACTCCTTGGTTGTTGCTTGGAACTTGAACACCCTTTGCTAATATACGAGTACATTTCAAATGGGACCCTTTTTGATTACCTTCATCGCCACTCTTGTGGCACAAGGAAACCACTCAAATGGAACCAAAGACTCAAAATTGCACACCAAACAGCTGAAGGGCTTTCATATCTGCATTCTTCAGCTGTGCCACCCATTTACCACCGAGACGTGAAATCAAGCAACATACTTCTTGATGACAAGCTTGATGCCAAGGTATCTGACTTTGGCTTATCAAGGCTTGTTGAACTGGCTGAAGAAAACAAGAGTCATATCTTCACTAGTGCACAAGGGACACTAGGGTACCTAGACCCTGAGTACTATCGTAACTTTCAGTTGACGGATAAGAGTGATGTTTATAGCTTTGGAGTGGTGCTGATGGAGTTACTCACTGCTCAGAAAGCCATTGATTTCAACAGGGAAGAAGAGAGTGTGAACTTGGCCATGTATGGGAAGAGGAAAATGGTTGAGGAGAAGTTGATGGATGTGGTTGATCCTTTGCTTAAAGAGGGGGCCAGTGATTTGGAATTAGAAACTATGAAGTCATTGGGGTATCTTGCAGTTGCATGCTTGGATGATCAGAGGCAAAAACGGCCTTCAATGAAAGAAGTTTCTGATGATATTGAATACCTGATTAAAGTTGTTAAAGGTCAAGTTTCCAAATCATGA 1974 0.4777 MVPLSTFMDQLNIITMLIFTTMALLLSRAEAMRKCGNCGPNPVPYPLSTGSDCGDPSYKIRCTAGTLWFDALAGSSYVIKSIDPLNRLIILQPATLAPKTCVSTDFRSEGMHLNETLPFSVASRNTVFLFNCTAHAPSMSCSASSACRSYIKEHADFSACWSVGTCCEYRSGGARKEYAVRVHGRDCTAYESFVDFNVTAATLGKRWPEGGVGIEWVAPQEPVCKEAIDCKEFLSSKCGVGPSGGVQRCLCDAGFKWDPINASCQPQTQTQTQSRKCTGHGKDSHCKVRKKKKMLLAVVVSFGGMIFVVAVIGVIFYKKRNQAKRKTKTKEAKISKRKEISSVKASALSSRIFTGREIRKATNNFSQENLVGTGGFGEVFKGTFDDGTVFAIKRAKLGCNKGIDQMQNEVRILCQVNHRSLVRLLGCCLELEHPLLIYEYISNGTLFDYLHRHSCGTRKPLKWNQRLKIAHQTAEGLSYLHSSAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEESVNLAMYGKRKMVEEKLMDVVDPLLKEGASDLELETMKSLGYLAVACLDDQRQKRPSMKEVSDDIEYLIKVVKGQVSKS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00615 657 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 338 440 - -
Spst1g00615 657 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Spst1g00615 657 Gene3D Transferase(Phosphotransferase) domain 1 441 655 - -
Spst1g00615 657 Pfam Protein kinase domain 366 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00615 657 CDD STKc_IRAK 371 644 - -
Spst1g00615 657 FunFam Wall-associated receptor kinase-like 20 441 656 - -
Spst1g00615 657 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 32 646 IPR045274 GO:0007166
Spst1g00615 657 SUPERFAMILY Protein kinase-like (PK-like) 339 643 IPR011009 -
Spst1g00615 657 Gene3D Phosphorylase Kinase; domain 1 322 440 - -
Spst1g00615 657 SMART serkin_6 365 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00615 657 ProSiteProfiles Protein kinase domain profile. 365 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00615 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00615 Spst-Chr1 8053096 8056018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00615 34 657 Receptor kinase-like Gene Family AT5G02070 54.732 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst1g00615 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00615 - - aprc:113862410 1014.99