Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00587 ATGCAAGGAGGTAAGATGAAGCTAGATGAGGATCTACGACCTGATCGTGAGGATGATTTCCAAACAGATGATGAAGAAAATCAGGCACACAGGGTGTTTGAAAATTTGGATGATGATTCTGATTCAGATAATTCACCTCTTTCGCCAAGTTTGTCCAATGAGATTTCCACGATCTCTTGGCCTCAAAGTTATAGGCAATCTATGGACATGTTAACTAGTGCAACACCTCCTGGACTAAATCTCTTAAAAAGAATTGGTTCAGTAGGGAGAAGTAACTCTTCCATCAAGAGATCCAAAGAAGATTCTTCTCTAACTCTACCCTTTGTTTCTGAGACAAATTTAATCAAACAAGACGAACACCATGCCTCGACACCTTGCCTACAGCCACTTGTTTCTAGCAGTGCCAGATTTTCTGTGAACGAATTGCCACCACCACAACAACAATGTTCATTTACAAAATCATTAACTCTATGCTCAGTTGGAGGAATATTTGCAACAATAGTTGTTGCACTTTGCTTGTTTTGGGTTGGTACGGTTGACAAAGTTGCTGGATTTAAGCCAGGAGAAAAAGTTTTAGACTTGGCTCACTTACCTGTCTCAATTGGTCTCTATAGTTTTTGCTTTGCTGGTCATGCAGTTTTTCCTAACATCTACTCTTCTATGAAGGAACCATCCAAATTTCCATCAGTGTTATATGTCTGCTTTGCCTTTTGCCTTGTTATGTATGTGAGTGTGGGAATAATGGGCTATATAACATTTGGTGACTTAGTTTCATCTCAGTTTACTTTAAACATGCCTAAAGAATTATGTGCATCTGAGATTGCAACTTGGACTACGGTTGTGACTCCATTGACAAAGTATGCCCTAACGTTATTGCCTATTGCACTAAGTATAGAGGAACTAGCCACCTCTCCTAGGCTAAGATGTCATGCTGTCTCGGTTTTTGTCAGAACTACTTTAGTGATTTTAAGCTTATTTGTGGCTCTCTCTATTCCATATTTTGTAGGGACACTTGTGTTTTGCTTTGAAAGAATTGAGGGATAG 1044 0.3927 MQGGKMKLDEDLRPDREDDFQTDDEENQAHRVFENLDDDSDSDNSPLSPSLSNEISTISWPQSYRQSMDMLTSATPPGLNLLKRIGSVGRSNSSIKRSKEDSSLTLPFVSETNLIKQDEHHASTPCLQPLVSSSARFSVNELPPPQQQCSFTKSLTLCSVGGIFATIVVALCLFWVGTVDKVAGFKPGEKVLDLAHLPVSIGLYSFCFAGHAVFPNIYSSMKEPSKFPSVLYVCFAFCLVMYVSVGIMGYITFGDLVSSQFTLNMPKELCASEIATWTTVVTPLTKYALTLLPIALSIEELATSPRLRCHAVSVFVRTTLVILSLFVALSIPYFVGTLVFCFERIEG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00587 347 MobiDBLite consensus disorder prediction 23 38 - -
Spst1g00587 347 PANTHER OS05G0424000 PROTEIN-RELATED 154 338 - -
Spst1g00587 347 MobiDBLite consensus disorder prediction 1 15 - -
Spst1g00587 347 MobiDBLite consensus disorder prediction 1 54 - -
Spst1g00587 347 Pfam Transmembrane amino acid transporter protein 149 336 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00587 Spst-Chr1 7693351 7697024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00587 155 334 Amino Acid or Auxin Permease AAAP Family AT5G02180 54.444 1.94e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00587 K15015 - qsa:O6P43_016746 237.269