Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00570 ATGAAGCAACGGCACAAGTTGAAGCAGTGGTGGGTTCTTAAAGCAGAGAGAAAGTGGAAACCAAGGTGCAGAGAGAGAGAGAGGATAGGTGTTGTTGTGTTGTGTAGTGCTGTGTTGGAGGCTCGGAGGAGTCAAGGCAGAGAGGTTCAGGGTCCAGAAAAGGCTACCATATCATTTACAAAAGCCACCATCAACAAAGTGATCAAAGTTCCTCTTTTGACTCTTTGTGCCTCCTTCCACGAGCCTGCTCATCAAACCCCTAATCATAAAAAGTTGAATAAGGCCTCTGAAATCTCAGCTACTGAGTGCGTAATCACTGAGATCTGCCTTCATCCTGGGGTAGTTTTGTTGATGGGTGCTTGCTGGAGTAATAGGATTAAGGCCGTGAGTCCTTCCAATACAGGGATCACCTCTAGAAGTGTCAGCAGGAGTGGCCATGACATCAGCTCAACTAGCAGGAACTCATCCGCCTCAATATCCGTCACTTCTCGGAGTGAAGGTGAAATCATGCAATCGTCCAACTTGAAACACTTCAGCTATAATGAGCTAAGAGCAGCCACAAGAAACTTCCGCCCAGATAGTGTATTGGGAGAGGGTGGGTTTGGTTCAGTTTTTAAGGGCTGGATTGATGAGCATTCACTTACTGCCACCAGACCAGGAATAGGCATGATTGTCGCTGTGAAGAGGCTTAACCAAGATGGTTTCCAGGGTCACAGAGAATGGTTGGCTGAAATCAACTATCTTGGGCGACTGCAGCATCCTAATCTTGTCAAGTTAATAGGATACTGCTTTGAGGATGAGCATCGGCTTCTGGTTTATGAATTTATGCCTAAGGGTAGCATGGAAAATCATCTTTTTAGAAGAGGTTCTTACTTTCAGCCATTCTCTTGGAGTTTGCGAATGAAAATAGCACTTGGGGCTGCAAAGGGCCTTGCTTTTCTTCACAGTACAGAACCTAAAGTCATATACCGTGACTTTAAAACTTCAAATATCCTACTTGATACACATTATAATGCCAAACTTTCTGATTTTGGATTGGCCAGAGATGGTCCAACTGGTGATAGAAGTCATGTCTCTACTAGGGTCATGGGAACCCGAGGGTATGCGGCTCCAGAGTATTTAGCAACAGGTCATCTCACTGCCAAGAGTGACGTATATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCAGGAAGACGAGCTATAGACAAGAACCAGCCATCTGGGGAGCATAACCTTGTTGAATGGGCCAAGCCGTACCTGTCTAATAAGCGAAGAGTTTTTCGGGTAATGGATCCACGTTTGGAAGGTCAATATTTACACAGTCGAGCTCAAGCAGCAGCTGCACTTGCTATGCAATGTCTTTCTGTAGAGCCTAAGTGCAGACCAAATATGGATGAGGTGGTAAAAGCATTGGAGCAGCTTCAGGAATCAAAGGACATGCAGAGAAAAGGTGCAGATCATAAACATCATCATGTACGCAATTCCGGTCAAGGCCGGTCCACTGGCGCCAATGGTGGTGCAGATGTGCCTACAAAGGCTTCTGCTTATCCTAGACCTTCTGCTTCTCTCCTCGCCGGTTGA 1584 0.4571 MKQRHKLKQWWVLKAERKWKPRCRERERIGVVVLCSAVLEARRSQGREVQGPEKATISFTKATINKVIKVPLLTLCASFHEPAHQTPNHKKLNKASEISATECVITEICLHPGVVLLMGACWSNRIKAVSPSNTGITSRSVSRSGHDISSTSRNSSASISVTSRSEGEIMQSSNLKHFSYNELRAATRNFRPDSVLGEGGFGSVFKGWIDEHSLTATRPGIGMIVAVKRLNQDGFQGHREWLAEINYLGRLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDTHYNAKLSDFGLARDGPTGDRSHVSTRVMGTRGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNQPSGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYLHSRAQAAAALAMQCLSVEPKCRPNMDEVVKALEQLQESKDMQRKGADHKHHHVRNSGQGRSTGANGGADVPTKASAYPRPSASLLAG 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00570 527 ProSitePatterns Protein kinases ATP-binding region signature. 196 228 IPR017441 GO:0005524
Spst1g00570 527 Gene3D Phosphorylase Kinase; domain 1 164 275 - -
Spst1g00570 527 Pfam Protein kinase domain 193 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00570 527 SUPERFAMILY Protein kinase-like (PK-like) 174 476 IPR011009 -
Spst1g00570 527 FunFam Probable serine/threonine-protein kinase PBL8 276 492 - -
Spst1g00570 527 CDD STKc_IRAK 196 475 - -
Spst1g00570 527 ProSiteProfiles Protein kinase domain profile. 190 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00570 527 Gene3D Transferase(Phosphotransferase) domain 1 276 500 - -
Spst1g00570 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
Spst1g00570 527 PANTHER OS01G0588500 PROTEIN-RELATED 154 476 - -
Spst1g00570 527 MobiDBLite consensus disorder prediction 479 527 - -
Spst1g00570 527 MobiDBLite consensus disorder prediction 130 163 - -
Spst1g00570 527 FunFam Serine/threonine-protein kinase BIK1 156 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00570 Spst-Chr1 7481099 7497095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00570 139 480 Glycoside Hydrolase AT3G07070 47.399 4.03e-105 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst1g00570 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00570 - - gmx:100793817 759.214