Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00563 ATGGGTAACCGAATCAGCAACCTCTGCCTCTGTTCGTCCGGCGACGCCTCCGGAAGGTTCGAGAACAGAGTTTCCTTCCTCTCCAAGCAACACCAGAATTCCCTCGGAAACTCTATTTGCTATGTGAGACCCGACACGTGTCGGTTCTCCGGCGAGACGTTTTCTGACGATGACATCACCCTCGTAACTTTCCGATCTGTTTCCGGCGCCACCGTGAGTGCAAACACGTCGGCCACGCCTTCAACTGCGCTCGATGATTGGCTTCAACACGGCACCGTTTTGGATTCCTCTGCCTCGTTTGAGAGCTCTGGCTCCTTCACGTCCACCTTGGTGCCTTTTCAGCATCAGCATGTTCCTCGTGAATCCTCTCTGGGAGGGTGTACGGAAAGAGGGTTGTTTTGGGGTGCTCGTGACCGTGTGATGAATGATGAAGGTTCGATCGAGAAAGGTTCTTCTGAGGTAGCAATGAATAAGGGGAAGCGAAGTAAGAGACATTTGAAAAAGGTTTTCAGAAGGATATCCATTGGGGGAATGTCTATTTTCAAGAAAAATGATAGTACTAATTCCAGAGTGAGTTGTAGTACTAGTTTGAGTGCTGAGATGAGTTTGCATGGTGTTGAGGGTAATAACTATTTGGATGGTGATGTTTTGATGGGCTGTGAGAATCTTCACTGGGCTCAAGGGAAAGCTGGTGAGGATCGTTTGCACATTGTGATTTGTGAGGATCATGGATGGGTTTTTGTGGGGATTTATGATGGGTTTAATGGCCCTGATGCCACTGATTTTCTTCTCAACAATTTGTTTTATGCCTTAAATGATGAGCTCAAGGAGATCTTGTGTGGTCACAACAAGTTTGAGCTCAAGGGTTCAGACTCTTCGGAATTGGGGGAGAAGGTGTTGCTTAAGAGAAATGGAGTGGTTGATGATTGTGGTTCTTCAGGTGAAAATAGAGAAAACTATCCAATAGAAAATGAAGAGTTAAATGTGGAATGCGTGTCAGAAGGAGTAGAGGGAATGAATGGGATAAATTGTGAAAGAGTAGATTTAAGTCACTCAGATGTGTTACAGGCTCTTTCAGAGGCATTGAGGAAGACCGAGGATGCATTCATGAGGACTGCTGAAGAGATGATTGGTCACAACCCTGTGTTGGCTATGATGGGTTCTTGTGTTTTGGTGATGTTGATGAAGGGTCAAGATGTTTACTTGATGAATGTGGGAGATAGCCGTGCTGTATTGGCCACTCACAGTGGGGAATCTCTTCAGCTCACCATGGAGCATAGCACTCACGTGAAAGAGGAGGTTTACAGAATCAGGAGGGAGCACCCTGATGACCCTTCGGTAGTAACTAGAGGCCGGGTGAAGGGTCGTTTGAGTGTCACAAGGGCTTTTGGGGCAGGGTTCCTCAAGCAGCCTAAGCAAAACAATGCAGTGTTAGAGACGTTCAGAGTGAGCTACATAGGGGAATCTCCATACATCACATGTTTCCCTTCACTCCACCACCACAAGCTCAATCCAAATGACAAGTTCCTCATATTGTCTTCAGATGGACTTTACCAATACTTCACCAATGAAGAAGCAGCTGCCAAAGTAGAGTCATTCATCACCATGTTTCCTGATAGAGATCCTGCACAACTTCTCATTGAAGAAGCACTAGGTCGAGCAGCACATAGGGCTGGTTTGGAGTTCCATGAACTGCTTGATATTCCTCAGGGGGAACGCCGTCATTACCATGATGACATTTCTGTTGTCGTAATCTCATTAGAGGGAAAAATATGGCTGCAACACTTCCAGCTGCCAGTCCAGAAACTATTTGAATCCCTTGTTAAGGCCATCTTTCTCTTCTGGGTTTACAAGCAGCCCAGAATTGCATCAGGAAAATCTAGTTTGCAGTTAGGGGCATGCATATGA 1908 0.4617 MGNRISNLCLCSSGDASGRFENRVSFLSKQHQNSLGNSICYVRPDTCRFSGETFSDDDITLVTFRSVSGATVSANTSATPSTALDDWLQHGTVLDSSASFESSGSFTSTLVPFQHQHVPRESSLGGCTERGLFWGARDRVMNDEGSIEKGSSEVAMNKGKRSKRHLKKVFRRISIGGMSIFKKNDSTNSRVSCSTSLSAEMSLHGVEGNNYLDGDVLMGCENLHWAQGKAGEDRLHIVICEDHGWVFVGIYDGFNGPDATDFLLNNLFYALNDELKEILCGHNKFELKGSDSSELGEKVLLKRNGVVDDCGSSGENRENYPIENEELNVECVSEGVEGMNGINCERVDLSHSDVLQALSEALRKTEDAFMRTAEEMIGHNPVLAMMGSCVLVMLMKGQDVYLMNVGDSRAVLATHSGESLQLTMEHSTHVKEEVYRIRREHPDDPSVVTRGRVKGRLSVTRAFGAGFLKQPKQNNAVLETFRVSYIGESPYITCFPSLHHHKLNPNDKFLILSSDGLYQYFTNEEAAAKVESFITMFPDRDPAQLLIEEALGRAAHRAGLEFHELLDIPQGERRHYHDDISVVVISLEGKIWLQHFQLPVQKLFESLVKAIFLFWVYKQPRIASGKSSLQLGACI 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00563 635 PANTHER PROTEIN PHOSPHATASE 2C 187 586 IPR015655 GO:0004722|GO:0006470
Spst1g00563 635 SMART PP2C_4 216 585 IPR001932 -
Spst1g00563 635 ProSiteProfiles PPM-type phosphatase domain profile. 217 587 IPR001932 -
Spst1g00563 635 Gene3D - 189 595 IPR036457 -
Spst1g00563 635 SUPERFAMILY PP2C-like 228 588 IPR036457 -
Spst1g00563 635 Coils Coil 355 375 - -
Spst1g00563 635 CDD PP2Cc 229 587 IPR001932 -
Spst1g00563 635 Pfam Protein phosphatase 2C 350 552 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00563 Spst-Chr1 7291049 7296503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00563 1 592 PP2C-type Phosphatase Gene Family AT1G07630 44.559 1.57e-169 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00563 - K01102 gmx:100804061 972.23