Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g00533 | ATGCACGTTCAATTTCCTGCACCATTGGAAAAGTATGTTCCCACCATGCTGAACAAGGTTATCGCGGTGGATTCAGTTCTTCAGGACCTTATGGGAGGCATAGCTCAAGACAAAGATTTGTCTTCACGACGAAGATCTGTAGTTGAAAAGTTCATGGCGTTTCTCAAGTCTTTCTCTCTCTACATTTCCATGTCCTTGTTCTTCTTCCTCTTCTTTTGCTTCTGCAAAGCCAGTACTACCACCGCAAAGTTATTGTCCCCTTCACCATCCACTTCCTCTGATGTTGAACTTCTCTTGGGAAAAATCAAAGCTTCACTGCAAGGTAACTCTGACAACCTTGTTTTGTCTTCATGGAACTCCTCTATCCCACTTTGTCAGTGGAGAGGCCTCAAGTGGGTCTTCTCCAATGGCACTTCTCTTTCATGCACTGACTTGTCCTCTCCGCAATGGACCAATCTTACACTCCACAAGGACCCTTCTCTTCACTTGCTTTCTCTTCAGCTCCCATCTGCAAACCTCTCTGGTTCCCTCCCCAGAGAACTTGGGGGGTTCCCGATGCTTCAAAGTTTCTACCTGAACATAAATTCATTACAGGGAACCATCCCTCTTGAGCTTGGCTACAGCTCCTCCCTCTCTGACATTGATTTGGGTGACAATATGCTAAGTGGGGTTCTTCCCCCATCCGTTTGGAACTTGTGTGACAGGCTTGTTTCCCTTAGGCTCCATGGTAATTCACTCTCGGGGTCTGTTTCCGAGCCTGCATTGCCCAACTCATCTTGCAAGAATTTGCAGTTGCTTGATTTAGGTGGCAACAAGTTTTCTGGGAGTTTCCCTGAGTTCATCACAAAGTTTGGTGGGCTAAAGCAGCTTGACTTGGGGAACAACTTGTTCACGGGTACAATTCCTCAGAGTCTAGCTGGGCTGAGGCTTGAAAAATTGAATCTTTCCCACAATAACTTTAGTGGGGTTTTGCCTTTCTTTGGAGAATCGAAGTTTGGTGTGGATGCTTTTGAGGGTAATAGCCCTGGCTTGTGTGGGCCACCTTTGGCAAGCTGTGCTAGGACCTCTACACTAAGTTCTGGTGCAGTTGCTGGTATTGTTATTAGTCTGATGACAGGGGCTGTGGTTTTAGCCTCTTTGCTGATTGGGTATATGCAGAACAAGAAGAGGAAGGGGAGTGGAGAGAGTGAAGATGAGTTGAATGAAGAAGAGGAAGATGAAGAGAATGGTGGTAATGCTATCTGTGGAGCTGGTGAAGGGAAGCTTATGTTGTTCCCTGGAGGTGAGAATTTGACATTGGATGATGTGTTGAATGCAACTGGGCAAGTTTTGGAGAAGACTTGTTATGGGACAGCTTATAAGGCTAAGCTTGCCGATGGAGGCACCATTGCTTTGAGGTTGTTGAGAGAAGGTAGCTGCAGAGATAGGGCTTCATGTTTGTCAGTTATTAAGCAATTGGGAAAAATTCGCCATGAGAATTTGATTCCTTTGAGGGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTCCTTATCTATGACTATCTGCCTCTTAGAACCCTTCATGATCTTTTACATGAACCTAAAGTTGGAAAGCCAGTTCTGAACTGGGCCAGGCGACACAAGATTGCATTGGGCATAGCAAGAGGTCTAGCTTATCTTCACACCGGACTAGAAGTTCCTGTCACTCATGCAAATGTAAGGTCCAAGAATGTGCTTGTGGATGACTTCTTTGCAGCCAGGCTAACGGATTTTGGCCTGGACAAGCTGATGGTTCCTTCCATAGCAGACGAAATGGTGGCGCAGGCCAAGACAGATGGCTACAAGGCCCCTGAGCTTCAAAGAATGAAGAAATGCAGCTCCAGGACTGATGTCTATGCTTTTGGCATACTCCTGCTTGAAATCTTGATTGGGAAGAAGCCTGGAAAGAATGGAAGAAGTGGTGAGTATGTGGACTTGCCCTCGATGGTGAAGGTGGCGGTTTTGGAGGAGACGACAATGGAAGTGTTTGATGTGGAACTGTTGAAAGGGATAAGAAGTCCTATGGAAGATGGGTTGGTGCAGGCACTGAAGCTGGCAATGGGGTGCTGTGCACCAGTGGCATCCGTGAGGCCAAGCATGGATGAAATTGTGAGGCAGTTGGAGGAGAATAGACCAAGGAACAGGTCTGCATTATACAGCCCTACAGAAACAAGAAGTGGAAGTGTTACACCATTTTGA | 2217 | 0.4655 | MHVQFPAPLEKYVPTMLNKVIAVDSVLQDLMGGIAQDKDLSSRRRSVVEKFMAFLKSFSLYISMSLFFFLFFCFCKASTTTAKLLSPSPSTSSDVELLLGKIKASLQGNSDNLVLSSWNSSIPLCQWRGLKWVFSNGTSLSCTDLSSPQWTNLTLHKDPSLHLLSLQLPSANLSGSLPRELGGFPMLQSFYLNINSLQGTIPLELGYSSSLSDIDLGDNMLSGVLPPSVWNLCDRLVSLRLHGNSLSGSVSEPALPNSSCKNLQLLDLGGNKFSGSFPEFITKFGGLKQLDLGNNLFTGTIPQSLAGLRLEKLNLSHNNFSGVLPFFGESKFGVDAFEGNSPGLCGPPLASCARTSTLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKRKGSGESEDELNEEEEDEENGGNAICGAGEGKLMLFPGGENLTLDDVLNATGQVLEKTCYGTAYKAKLADGGTIALRLLREGSCRDRASCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHEPKVGKPVLNWARRHKIALGIARGLAYLHTGLEVPVTHANVRSKNVLVDDFFAARLTDFGLDKLMVPSIADEMVAQAKTDGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKNGRSGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMDEIVRQLEENRPRNRSALYSPTETRSGSVTPF | 738 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g00533 | 738 | Gene3D | Transferase(Phosphotransferase) domain 1 | 516 | 730 | - | - | |
Spst1g00533 | 738 | FunFam | Leucine-rich repeat receptor-like protein kinase | 260 | 352 | - | - | |
Spst1g00533 | 738 | Pfam | Leucine rich repeat | 262 | 320 | IPR001611 | GO:0005515 | |
Spst1g00533 | 738 | SUPERFAMILY | L domain-like | 127 | 326 | - | - | |
Spst1g00533 | 738 | Gene3D | Phosphorylase Kinase; domain 1 | 427 | 514 | - | - | |
Spst1g00533 | 738 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 69 | 717 | IPR046959 | - | |
Spst1g00533 | 738 | Gene3D | Ribonuclease Inhibitor | 258 | 356 | IPR032675 | - | |
Spst1g00533 | 738 | MobiDBLite | consensus disorder prediction | 719 | 738 | - | - | |
Spst1g00533 | 738 | Gene3D | Ribonuclease Inhibitor | 93 | 255 | IPR032675 | - | |
Spst1g00533 | 738 | MobiDBLite | consensus disorder prediction | 390 | 412 | - | - | |
Spst1g00533 | 738 | SUPERFAMILY | Protein kinase-like (PK-like) | 442 | 714 | IPR011009 | - | |
Spst1g00533 | 738 | Pfam | Leucine rich repeat N-terminal domain | 99 | 129 | IPR013210 | - | |
Spst1g00533 | 738 | ProSiteProfiles | Protein kinase domain profile. | 438 | 738 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g00533 | 738 | Pfam | Protein tyrosine and serine/threonine kinase | 442 | 713 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g00533 | Spst-Chr1 | 6823201 | 6836601 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g00533 | 66 | 738 | Receptor kinase-like Gene Family | AT3G24660 | 73.887 | 0.0 | 946 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Spst1g00533 | PK_Tyr_Ser-Thr | 5.9e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g00533 | - | - | gmx:100814814 | 1197.96 |