LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g00523	ATGGACGCAGAAATTGAACCTTCATGTGATAGTTGGTTTTATGGCACTCAACTTGGTCTGAAATACTCATCAGTTTGTCGTAGACTCTTGCGCCCTTCTAAAGTATTAAAGATTGAAGATGTGATCCTCCTCTCTTTGGTTCTTGGGTCGAGAGTAGATGAGAAAATTGCACTAAATAAGACAAAAATCCTGTTAGGTAGCAACACTGGTAAAGATCCTAGGGTGTTTCCTGAACACGCCCAACAAGAACTATCAGGTGGTGTTTCAAGTACAGGACGTCTTGTACAAAATATCACTATGCAGACAGGAGAGGAATTTTCTGTGACTGCTGGAAGGGTTCTTGTTTCACCCGACATACCTCGAAATCGTGAGAATGTGTTTGGATTGAATAGGGAGAATGACAATGTGAGATATGAAGATCTTACTAATATTTTGGGGTTGACGAGAATGAACTCTGAGAATTCTTCTGACATATCTGACTTTGCATCTATAAAACAGTCAGTTCAGGAGAAGGAAAATGGTGCTTCTGTAAACATTTTTAACAAAATTCAAAAGGGAGATGGTATGTTGAGGAAGGCTGTTGAAGAACCAGTCGGTGACCAGTCTGGTATCCCAGTTGTATCACCCTTTCACAGATATAAAGCTTCTCAGTCCAATGGATTTTCTGGTTCAGGGGTTTTTGATGATTTTCTGTATGGGAAAATGAAGTTTCTGTGCAGTTTTGGTGGAAAAATATTACCAAGACCCAGTGATGGGAAACTCAGATATGTAGGGGGAGAGACCCACATCATATCTATCCTAAAGGATATTTCATGGGAAGAGCTTATGAAGAAGACCTTGGGTATTTGCAATCAACCTCACACTATCAAGTACCAGCTTCCAGGGGAGGATCTTGATGCTCTAATTTCTGTTTCCTCTGACGAAGATCTTCAAAATATGAAAGAGGAATACCATGGGCTTGAAAGGCATGAACGTTCACAAAAACTTCGAATTTTTTTAGTCCCTTTGGGTGAATCTGAAGAGACATCATCAACAGAGGTGAGTGCTGTTCAGCAGGGTGATCCTGATTACCAATATGTTGTCGCCGTAAATGGCATGGGAGACCCTGCTAGGACAAACATTGGTGGGCAGAATTTGACAAATGAATCTAGTCAGTTGGGGACAGATTTGAATTTTGCTCCAGCTCTCTTGAAAAATCCAAATGCTTCTCCTTTGGAGATTAGGAATGCTATTAATGCTTTAAATTCAGATGGAATTTTGAATGATTCCCTGAATTTGCAGAGGCCCTTGCCAATTCCTCTCACTTCAATTCCAGTAACAGGTTCTAGCACAGGTTATATACAATTACTCGGTGACCACTCATGTCAGGGAAGCATTGACAGTAATGCATCCTTTGCTACTGCTCAGCTACATCCTGAGTACTCCAATATAAGCACTTGTAATTGCAGAAACCCTCAGCATGTGGCTGCTACTTTGCTAAGTGACACCTTTCCTTATCAGTATGGTGATGTTGGTCAGCCCGATAAGCTCAATGGAGGTCATTTGGACTACAATCCTGGCAAGGAATTAGTGACTCCTGTACATGTTAATCCCAGAGATGAAGCTTTTGGTAGAAAGTCCTTGCAAAGGGAAGGAAGGATCTACTCTGAAAGACCTGTTTCACACTTGGATGATCCAATCTGTCAACAGGGTGAATCTTATGGAATTACAGATTCCCCTCATGGGATGCCTCATGCCTTTTCTGATCCACAGTTGCAAGAGAGTGGAGCAAGGTCTGGGCACTGCTCCCAAAATGGATATGGTCAATCTTTCTCCTTGAATCTTGGAAAGGGTCAATTATCTTCAACGTTAATCACTAGTGTCTCACAAGTGAACGTTATGGAGCATCTGTACGATTCCATTGTCCATCATCCTCAAATTCAAAGTACAGCACCAAAAATTGAGTCAGTTGAGACACACAAAAGGCAAGATTTGGCATCTTCTCAATACTATGAGTCAATGGGAATGAATGATCTTGTTCACATGGATAACATTTCAACTGAAAAAAAGAAATTTATTGCTCAAACTGAGTTGAGTATACCCAGCTATGTTGCAAAGGATGTTCAGGAAAATTCTGTGAAATTAAAAAGGATGAACATAATTGAACAGAAGAATTCTATTCCAAAGGATAGCAAGGTTCATGAGGGGAAATCAACTGTCTTTGATAAGGGATTTGTAACTGAATTGCATCTTTTTGACTCCGTTCCTACTAATAACTTAAATGATAATAATAATATGCAAAAGAATAGGGAGCTACCTTCTGAGGGTATTGTTCCTAGTCCATCAGGCACGATGGGCTTCTCCTTAAATAATCTAGTCGGAAAGGCCCTGTTTGATTCTGACATGAGCCTAAGGACTAGTGATCACAAAAAATATGCATTGGCTGAAGGTCTGAATGGTGAACAACGGTTTGATTTTTCATTGACCAGAAATTTTGATTTAAATGCTCCAATTTTGAATTCTGAAGTAGGCTCTTGTGACAAAAGTTCTCGAGGAGATCACATGTTCAAGCGGTCCATTCACCCAGTTTCTCTTAAACCTGCACAAAGTCATCCTTCAAAACATCATATGGTTCTAGGTTTTCAAGAAAATCCTGTAGTAAGCTCTGCAAGTTTGTATCCTGCTGCATTTTGTGATGATCTTGATCCAAATCTAAACATGTCTATAAATGGCCTTGATAGTTCAATTAATATTTTGTCGTTTAAAAAGGCACCATCTCTGCTTGATGACTTAATTACCAACAATGGTCAAATGGTGGATCAATTTATCCCTAAACACTTTGCCCCAGGAATGTCAATAGTTGAAGATAAAATTTCAGAACAATCAAAAGTTTTAGAAGGTTGTACTGATGTGAATCAAGGGGAGTCGTTCATAGTAGCAGACATGACTGGTGTTGTTCATCCATATATTTCTGGTGATGTTGTAAATGGTGTCATATCCCCATCTCATATGGAAGAGAGCATCATCCCTGAGTTTGAACCCGAGGATTTCAATGAAGACAAAAATAAATTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCTAGCATTTATGACTTTGCTAATTCAATAATAAGGAATGCTGATCTTGAAGAACTTACGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAGAGAATTAAAAGGAGCTGCTTTGCAGGGAGGTCTTCCGAGCAAGAACGGTTGGCAAAAGATTTCTGGAGAGAGGCACAAATCCTCTCAAATCTTCACCATCCCAATGTGGTTGCATTTTATGGAATAGTACCGGATGGGTCTGGAGGAACCTTAGCAACTGTAACAGAATACATGGTTAATGGTTCCCTTAGGCATGTCCTTGTAAAGAACAACAGATTACTTGATCGCCGTAGAAAACTAATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAAAATATCGTCCATTTTGATTTGAAATGTGACAATTTGCTTGTCAATCTAAGGGATTCACAACGACCAATATGCAAGGTTGGAGATTTTGGACTATCAAGAATTAAACGCAATACCCTTGTATCTGGAGGTGTGCGAGGAACCCTTCCATGGATGGCACCAGAGCTTTTGAATGGGAATAGCAGTCGGGTTTCTGAAAAGGTTGACGTTTTCTCATTTGGCATCTCAATGTGGGAGTTATTAACAGGAGAGGAACCTTATGCAGATATGCATTGTGGTGCGATTATTGGGGGCATTGTAAAGAACACTCTTAGACCTCCTGTGCCTGAAGGATGCGATTCTGAATGGAGGAAGCTTATGGAAGAGTGTTGGTCACCTGACCCCGAAAGGCGACCATCATTTACAGAGATCACTAGCAGGTTAAGATCCATGTCTCTAGTCCTTCAAGCAAAAGGGAATTATCAGGCACATCAGTTAAGACCCTCCTGA	3984	0.4024	MDAEIEPSCDSWFYGTQLGLKYSSVCRRLLRPSKVLKIEDVILLSLVLGSRVDEKIALNKTKILLGSNTGKDPRVFPEHAQQELSGGVSSTGRLVQNITMQTGEEFSVTAGRVLVSPDIPRNRENVFGLNRENDNVRYEDLTNILGLTRMNSENSSDISDFASIKQSVQEKENGASVNIFNKIQKGDGMLRKAVEEPVGDQSGIPVVSPFHRYKASQSNGFSGSGVFDDFLYGKMKFLCSFGGKILPRPSDGKLRYVGGETHIISILKDISWEELMKKTLGICNQPHTIKYQLPGEDLDALISVSSDEDLQNMKEEYHGLERHERSQKLRIFLVPLGESEETSSTEVSAVQQGDPDYQYVVAVNGMGDPARTNIGGQNLTNESSQLGTDLNFAPALLKNPNASPLEIRNAINALNSDGILNDSLNLQRPLPIPLTSIPVTGSSTGYIQLLGDHSCQGSIDSNASFATAQLHPEYSNISTCNCRNPQHVAATLLSDTFPYQYGDVGQPDKLNGGHLDYNPGKELVTPVHVNPRDEAFGRKSLQREGRIYSERPVSHLDDPICQQGESYGITDSPHGMPHAFSDPQLQESGARSGHCSQNGYGQSFSLNLGKGQLSSTLITSVSQVNVMEHLYDSIVHHPQIQSTAPKIESVETHKRQDLASSQYYESMGMNDLVHMDNISTEKKKFIAQTELSIPSYVAKDVQENSVKLKRMNIIEQKNSIPKDSKVHEGKSTVFDKGFVTELHLFDSVPTNNLNDNNNMQKNRELPSEGIVPSPSGTMGFSLNNLVGKALFDSDMSLRTSDHKKYALAEGLNGEQRFDFSLTRNFDLNAPILNSEVGSCDKSSRGDHMFKRSIHPVSLKPAQSHPSKHHMVLGFQENPVVSSASLYPAAFCDDLDPNLNMSINGLDSSINILSFKKAPSLLDDLITNNGQMVDQFIPKHFAPGMSIVEDKISEQSKVLEGCTDVNQGESFIVADMTGVVHPYISGDVVNGVISPSHMEESIIPEFEPEDFNEDKNKFLSDAMIAEMEASIYDFANSIIRNADLEELTELGSGTYGTVYHGKWRGTDVAIKRIKRSCFAGRSSEQERLAKDFWREAQILSNLHHPNVVAFYGIVPDGSGGTLATVTEYMVNGSLRHVLVKNNRLLDRRRKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDSQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPVPEGCDSEWRKLMEECWSPDPERRPSFTEITSRLRSMSLVLQAKGNYQAHQLRPS	1327

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g00523	1327	Gene3D	-	253	335	-	-
	Spst1g00523	1327	Gene3D	Phosphorylase Kinase; domain 1	1037	1130	-	-
	Spst1g00523	1327	CDD	STKc_MAP3K-like	1049	1306	-	-
	Spst1g00523	1327	FunFam	Octicosapeptide/phox/Bem1p domain kinase superfamily protein	1036	1130	-	-
	Spst1g00523	1327	Pfam	Protein tyrosine and serine/threonine kinase	1046	1306	IPR001245	GO:0004672\|GO:0006468
	Spst1g00523	1327	SUPERFAMILY	CAD & PB1 domains	250	340	-	-
	Spst1g00523	1327	ProSiteProfiles	Protein kinase domain profile.	1043	1312	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst1g00523	1327	PRINTS	Tyrosine kinase catalytic domain signature	1277	1299	IPR001245	GO:0004672\|GO:0006468
	Spst1g00523	1327	PRINTS	Tyrosine kinase catalytic domain signature	1125	1138	IPR001245	GO:0004672\|GO:0006468
	Spst1g00523	1327	PRINTS	Tyrosine kinase catalytic domain signature	1233	1255	IPR001245	GO:0004672\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g00523	Spst-Chr1	6745252	6756693	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst1g00523	231	373	MAP Kinase Kinase Kinase	AT1G16270	59.310	7.91e-41	162

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-6	Spst1g00523		PK_Tyr_Ser-Thr	8.2e-63	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g00523	-		-	pvu:PHAVU_008G122700g	2034.61

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