Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00508 ATGCTTTCTCCTTTGCCATATGGTTCAACCACCCTCAACCTCACAACACCACTGACACTGGTTTGGATGGCAAACCGCAATCAACCCGTAAATGGGAAGCTCTCAAAGATTTCCCTCTTAGACAGTGGTAACATCTTCTTGGTTGATGCCGATCAAGTCACCACTTGGTCCTCAAACACAGCATCAGATGCCCCAGTAGAGTTGCATCTCCGAGATGATGGGAATCTTGTTCTACGTGAGCCCCAAGGAACCATTCTGTGGCAAAGTTTTGATTTTCCAACGGATACTCTTCTTCCAGGTCAGCCTCTTACTAGATTCACACAACTTGTGTCTTCAAGAAGCCACACTAATCATTCATCTGGTTTCTATAAGCTGCTCTTTGACAATAACAACATCCTTAGCCTTATTTATGATGGCCCTGATGTTTCAAGCACATATTGGCCTCCACCTTGGCTACTCAGTTGGCAAGCTGGAAGATTTAATTACAATAACAGCAGAGTTGCTGTGCTGAGTTCTCTTGGAGACTTCACTTCATCAGATAATTACAAATTTTCCTCGGATGATCATGGCAAGGTGATGCCGAGAAGATTAACACTGGATTCTGATGGAAATGTTCGTGTGTACAGTAGAAATGAGGCTTTAAAGAAATGGTACATTTCATGGCAATTTATATTTGATACCTGTACCGTTCACGGGATTTGTGGTGCAAATAGCACTTGCAGTTATGATCCTAAAAGGGGAACGAGATGCTCGTGTTTACCAGGATACAGAGTGAAGAACCATAGTGATTGGTCTTCCGGGTGTGAACCCTTGTTTGATCTTACTTGCATTGGAAATGAGTCTACCTTTTTAGAGATGCAGGGAGTCGAGTTTTACGGCTATGATCATATTTTTCACCCAAACAGTACATACATGAACTGTGTAGATTTATGTTTGCAAGATTGTAACTGCAAAGGGTTTCAGTACAAATATGATGGGGAGTACTCTACCTGCTTTACAAAGATACAGTTACTGAATGGAAGGTATTCCCCACTATATAAAGGAACAATTTCTCTAAAACTGCCAAAAAACAATAACTTCTCCGAGGAAAAATCTATGAAGGCAGATGATCATGTTTGTTCAGTGGTGCATCACAAAGACTTTGTTAGAAAGTCAGCCAATCGTTTTGTGAGTTTTTCTTTGTGGTTTGCCACTGCACTTGGGGCTTTAGAAATGATTTGCCTTTCGATGATTTGGGGTTTCTTCATTAGGACCCGCCAAAAATCTAGTGCAGATCAACAAGGGTATCATTTCGCAGCAGTGGGAATCAGAAAATACAGCTATTCTGAGTTGAAGAAGGCCACAAAGGGGTTCAGTCAAGAGATTGGAAGGGGTGCAGGAGGGGTTGTGTACAAAGGAATTTTATCAGATAAAAGACATGCAGCAATAAAGAGACTGAATGAAGCTAAACAAGGAGAAGGGGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGGGCATATGGAGAATGGTACCTTGGCTGAAAATCTCTCATCCAACACGCTTGATTGGAGTAAGAGATATAACATTGCTCTTGGAATAGCAAGAGTTCTAGCATATCTGCATGAAGAATGCTTGGAATGGATTTTGCACTGTGATATAAAGCCCCAGAACATACTTCTTGATGCTAACTATCAACCCAAGGTATCAGATTTTGGCCTGTGCAAGCTACTAAACAGAAATAAGCTGCAGAAAAGTCCAAGGTTTTCAATGATAAGAGGAACTCGAGGCTATATGGCACCTGAGTGGGTGTACAATTTACCAATCACCTCCAAGGTTGATGTTTACAGCTATGGAATTGTTGTTCTGGAGATGATAACTGGAAAAGGTCCAAGAACGGGTGTGGGAAGCATTGATGGAGAAGAATCATATAATGGAAGTCCAGTAGCATGGGTGAAAGATAAAAAGAGTGGCACATGTTGGCTAGAACAAATCATTGATCCTGCAATTCAAACAAATTACGATGAATGTAAGATGGAGCTCTTGGCTAGAGTGGCTTTGGATTGTGTTGAAGAAAACAAAGATTTGAGACCCAGCATGAGCCAAGTAGTAGAAATGCTTCAAACCCATGAAAACTAA 2187 0.4134 MLSPLPYGSTTLNLTTPLTLVWMANRNQPVNGKLSKISLLDSGNIFLVDADQVTTWSSNTASDAPVELHLRDDGNLVLREPQGTILWQSFDFPTDTLLPGQPLTRFTQLVSSRSHTNHSSGFYKLLFDNNNILSLIYDGPDVSSTYWPPPWLLSWQAGRFNYNNSRVAVLSSLGDFTSSDNYKFSSDDHGKVMPRRLTLDSDGNVRVYSRNEALKKWYISWQFIFDTCTVHGICGANSTCSYDPKRGTRCSCLPGYRVKNHSDWSSGCEPLFDLTCIGNESTFLEMQGVEFYGYDHIFHPNSTYMNCVDLCLQDCNCKGFQYKYDGEYSTCFTKIQLLNGRYSPLYKGTISLKLPKNNNFSEEKSMKADDHVCSVVHHKDFVRKSANRFVSFSLWFATALGALEMICLSMIWGFFIRTRQKSSADQQGYHFAAVGIRKYSYSELKKATKGFSQEIGRGAGGVVYKGILSDKRHAAIKRLNEAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYGHMENGTLAENLSSNTLDWSKRYNIALGIARVLAYLHEECLEWILHCDIKPQNILLDANYQPKVSDFGLCKLLNRNKLQKSPRFSMIRGTRGYMAPEWVYNLPITSKVDVYSYGIVVLEMITGKGPRTGVGSIDGEESYNGSPVAWVKDKKSGTCWLEQIIDPAIQTNYDECKMELLARVALDCVEENKDLRPSMSQVVEMLQTHEN 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00508 728 ProSiteProfiles Bulb-type lectin domain profile. 1 91 IPR001480 -
Spst1g00508 728 Pfam Protein kinase domain 452 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00508 728 FunFam S-receptor-like serine/threonine-protein kinase 418 523 - -
Spst1g00508 728 Gene3D - 6 91 IPR036426 -
Spst1g00508 728 Gene3D Transferase(Phosphotransferase) domain 1 524 728 - -
Spst1g00508 728 Pfam D-mannose binding lectin 19 105 IPR001480 -
Spst1g00508 728 SUPERFAMILY alpha-D-mannose-specific plant lectins 18 108 IPR036426 -
Spst1g00508 728 PIRSF SRK 7 728 IPR024171 GO:0004674
Spst1g00508 728 CDD STKc_IRAK 455 724 - -
Spst1g00508 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Spst1g00508 728 FunFam Serine/threonine-protein kinase 94 221 - -
Spst1g00508 728 ProSiteProfiles Protein kinase domain profile. 449 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00508 728 Gene3D Phosphorylase Kinase; domain 1 414 523 - -
Spst1g00508 728 Pfam S-locus glycoprotein domain 172 259 IPR000858 GO:0048544
Spst1g00508 728 PANTHER OS07G0415500 PROTEIN 11 724 - -
Spst1g00508 728 ProSiteProfiles PAN/Apple domain profile. 276 350 IPR003609 -
Spst1g00508 728 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 524 728 - -
Spst1g00508 728 SUPERFAMILY Protein kinase-like (PK-like) 427 724 IPR011009 -
Spst1g00508 728 ProSiteProfiles EGF-like domain profile. 224 262 IPR000742 -
Spst1g00508 728 SMART serkin_6 449 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00508 728 SMART blect_4 3 93 IPR001480 -
Spst1g00508 728 Gene3D - 92 217 IPR036426 -
Spst1g00508 728 ProSitePatterns Protein kinases ATP-binding region signature. 455 477 IPR017441 GO:0005524
Spst1g00508 728 CDD PAN_AP_plant 272 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00508 Spst-Chr1 6572674 6574860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00508 393 724 Receptor kinase-like Gene Family AT5G45780 36.522 2.29e-62 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst1g00508 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00508 - - gmx:100785351 1211.05