Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00506 ATGTTTGATATCACCTGCAATTGGAATGAGTCTACCTTCTTGGAGATGCGGGGTGTTGAATTTTATGGGGGTTTCAGCATTCCTATACCGATAAAAAGGGCTTTTGCTTCAAGTGTTATACCAAAACACAATTGCTCAATGGACGACTTAAACTTCAAAGAGCTTATATCGAAACACATGCAAGTCGTATTGACCAGCCAAAAGTCTAACACAGATCAACAGGGCTACCATCTTACAGCAACGGGATTCAGAAAATTTAGCTACTCTGAGCTCAAAAAGGCTACAAAGGGGTTCAGTCAAGAGATTGGAAGTGGTGCAGGAGGGGTTGTGTACAAAGGCATTTTATCAGATCAAAGATATGCAGCAATTAAGAGACTGGATGAAGCTAAACAAGGAGAAGGGGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGATTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCAGAAAATCTCTCAACTAACACACTTGATTGGAGTAAGAGATATAACATTGCAATTGGAACTGCAAGAGTTCTAGCATATGTGCATGAAGAATGTTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAAAACATACTTCTAGATTCCAACTATGAGCCAAAGTTAGCAGACTTTGGCTTGTCTAAGCTCCTGAAGAGAGATAACCCCAACAATCCAAGCATCTCTATGATCAGAGGGACCAGAGGCTACATGGCACCTGAGTGGGTTTTTAACTTGCCTATCACATCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTTTTGGAAATGGTAACTGGGAAAAGCACAGCAACAAGTGTCCAAGATATTGATGGTGAAGAGGCATATGATGGGAGGCTAGTGGCATGGGTGAGAGAAAAAAGAAGCAACGCCAATTCATCCTGGGTGGAACAAATAATTGAACCTGCTATTGGACCTGATTATGATAAGAGTAAGATGGAAGTGTTGACTACAGTGGCTTTAAACTGTGTGATGGCACAGCCAGATGAGATTAGGGTTAAGAGAACAATTCCATGTAAGCTTGCATTGAATACGGCTTTGTCAATCACAATCTTTCTTCTAGCATCGTTATTGTCTTCTCAACCTTCATCTTCTTCATCCTCATTAAGAATGGGGTCTTGCCTCTCAGCGGAAAATCCAGAAGATATTCTCATCTCACCAAATGCTATCTTCTCTGCTGGCTTTTTAGCCATTGGTTATTCCTTTGCAATATGGTTCACGGAGCCTCATTTTCACAGCCCCAGCACTGTCACATGGATGGCAAACCGTGACCAACCTGTGAATGGAAAACGATCCAAGCTTTCCCTCACCCTCGATGCCAACTTAGTCTTGGTTGATGCTGCTTTTAACACTGCTTGGTCTTCAAACACTGTTTCATCAGCCCCAGTAGAGTTGCATCTCAAAGATGATGGCAATCTCGTGTTACGTGAGGTTCAAGGAACTGTTCTGTGGCAAAGTTATGATTTCCCAACCGACACCCTCGTTCCTGCCCAACCTCTTACCAGATACACAATACTTGTGTCTTCAAGAAGCGAGAGTAACCATTCCTCAGGTTTCTATAAGTTTTTCTTCGATGATAACAACGTTCTTGGTCTTCACTATGATGGTCCTGATGTTTCAAGCTCCTACTGGCCACAACCTTGGTTGCTTAGTTGGGATGTTGGCAGGACTTCTTTCAATAGTAGTAGAATTGGCGTGTTGAATTCTCTTGGGCTTTTCAATTCAACAGATAATTTCACTTTCGTAACATCTGATTATGGCACCGTGCTGCAGAGAAGGTTGAAAGTGGATTGTGATGGCAACGTTCGAGTGTATAGTCGAAATAATGTTTTGGGAAAGTGGTATGTTTCATGGCAAGCAATTTCTAGTGGTTGCATACCTCATGGGATTTGTGGACCCAACAGCTTGTGTGTTTATGATCGTGTCAGTGGAAGAAAATGTTTGTGTCTTCCTGGGCATAGATTAAAGAACCACAGTGATTGGTCTCAAGGGTGCGAACCCTTGTTTCATCTTACTTGCCATAAGAATGAGTCTATGTTCTTGGAGATTCCAAGTGTTGAATTTTATGGCTATGACAATCATTATGTAGAAGTTAGTAACTATAGTGCCTGTGAGAAGTTATGCTTGCAAGACTGCACTTGTAAGGGGTTTCAGCACTCCTACAGTGATGATAAACGCTTTTATAGGTGCTACACAAAAACGCAATTGCTCAATGGACGACGTTCACCTGTATTCCAAGGATCAACATACTTGAGATTGCCCAAAAGTAATAGCTTCTCTCACGAAGAATATGCCAGTGAACCTTTATATGATCATGTTTGTTATGTTCAACTTCAACGAGCTTATATCAAAACACATGGAAACCGTTTGGTAAAGATTTTCCTGTGGTTTGCTACCGCTCTTGGAGCTTTTGAAATGATTTGTGTTTTGGTGATTTGGTGCCTCCTAATTAGGACCAGACAAAAGTCTAAAGTTGGTCAAGAGGGCTACCATCATACAGAATCAGGATTCAGAAAATTTAGCTACTCTGAGCTGAAAAAGGCTACAAAGGGGTTCAGTCAAGAGATTGGAAGAGGTGCAGGAGGAGTTGTGTACAAAGGCATTTTATCAGATCAGAGACATGCAGCAATAAAGAGACTTTATAATGCTAAACAAGGAGAAGGTGAATTTCTTGCTGAAGTAGGCATTATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAACATAGGTTGCTGGTTTGTGAGTATATGGAGAATGGTTCTCTGGCAGAAAATCTATCATCCAACACACTTGATTGGAGTAAGAGATATAACATAGCTCTTGGAACGGCAAGAGTTCTAGCATATCTGCATGAACAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAAAACATACTTCTAGATTCCAACTATGAGCCAAAGTTAGCAGACTTTGGCTTGTCTAAGCTTATGAAGAGAGATAACCCCAACAATCCAAGCATCTCTATGATCAGAGGGACCAGAGGCTACATGGCACCTGAGTGGGTTTTGAACTTGCCTATCACATCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTTTTGGAAATGATAACTGGGAAAAGCACCACAAGAAGTATCCATAAGATTAATGATGAAGAAACATATGATGGAAGGCTGGTGGAATGGGTGAGAGAGAAAAGTGGCAGCAACACTAAATCATCGTGGCTGGAACAGATAATTGATCCTGATATTGGACCTGCTTATGATAAAATAAAGATGGAAATTTTGAGTTCAGTGGCTTTGAACTGTGCAATGGAAGACAGGGATTCAAGACCCACCATGAGCCAAGTAGTTGAGATGCTTCAATGA 3474 0.4125 MFDITCNWNESTFLEMRGVEFYGGFSIPIPIKRAFASSVIPKHNCSMDDLNFKELISKHMQVVLTSQKSNTDQQGYHLTATGFRKFSYSELKKATKGFSQEIGSGAGGVVYKGILSDQRYAAIKRLDEAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSTNTLDWSKRYNIAIGTARVLAYVHEECLEWILHCDIKPQNILLDSNYEPKLADFGLSKLLKRDNPNNPSISMIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMVTGKSTATSVQDIDGEEAYDGRLVAWVREKRSNANSSWVEQIIEPAIGPDYDKSKMEVLTTVALNCVMAQPDEIRVKRTIPCKLALNTALSITIFLLASLLSSQPSSSSSSLRMGSCLSAENPEDILISPNAIFSAGFLAIGYSFAIWFTEPHFHSPSTVTWMANRDQPVNGKRSKLSLTLDANLVLVDAAFNTAWSSNTVSSAPVELHLKDDGNLVLREVQGTVLWQSYDFPTDTLVPAQPLTRYTILVSSRSESNHSSGFYKFFFDDNNVLGLHYDGPDVSSSYWPQPWLLSWDVGRTSFNSSRIGVLNSLGLFNSTDNFTFVTSDYGTVLQRRLKVDCDGNVRVYSRNNVLGKWYVSWQAISSGCIPHGICGPNSLCVYDRVSGRKCLCLPGHRLKNHSDWSQGCEPLFHLTCHKNESMFLEIPSVEFYGYDNHYVEVSNYSACEKLCLQDCTCKGFQHSYSDDKRFYRCYTKTQLLNGRRSPVFQGSTYLRLPKSNSFSHEEYASEPLYDHVCYVQLQRAYIKTHGNRLVKIFLWFATALGAFEMICVLVIWCLLIRTRQKSKVGQEGYHHTESGFRKFSYSELKKATKGFSQEIGRGAGGVVYKGILSDQRHAAIKRLYNAKQGEGEFLAEVGIIGRLNHMNLIEMWGYCAEGKHRLLVCEYMENGSLAENLSSNTLDWSKRYNIALGTARVLAYLHEQCLEWILHCDIKPQNILLDSNYEPKLADFGLSKLMKRDNPNNPSISMIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMITGKSTTRSIHKINDEETYDGRLVEWVREKSGSNTKSSWLEQIIDPDIGPAYDKIKMEILSSVALNCAMEDRDSRPTMSQVVEMLQ 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00506 1157 CDD B_lectin 414 520 IPR001480 -
Spst1g00506 1157 FunFam Putative receptor-like protein kinase 171 367 - -
Spst1g00506 1157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Spst1g00506 1157 CDD STKc_IRAK 886 1157 - -
Spst1g00506 1157 ProSiteProfiles Protein kinase domain profile. 880 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00506 1157 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Spst1g00506 1157 CDD PAN_AP_plant 699 784 - -
Spst1g00506 1157 SMART blect_4 411 520 IPR001480 -
Spst1g00506 1157 FunFam S-receptor-like serine/threonine-protein kinase 849 954 - -
Spst1g00506 1157 SUPERFAMILY alpha-D-mannose-specific plant lectins 439 576 IPR036426 -
Spst1g00506 1157 FunFam S-receptor-like serine/threonine-protein kinase 65 170 - -
Spst1g00506 1157 Pfam S-locus glycoprotein domain 606 686 IPR000858 GO:0048544
Spst1g00506 1157 FunFam Putative receptor-like protein kinase 955 1157 - -
Spst1g00506 1157 ProSiteProfiles Protein kinase domain profile. 96 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00506 1157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 996 1008 IPR008271 GO:0004672|GO:0006468
Spst1g00506 1157 SUPERFAMILY Protein kinase-like (PK-like) 71 306 IPR011009 -
Spst1g00506 1157 Gene3D Transferase(Phosphotransferase) domain 1 171 364 - -
Spst1g00506 1157 Gene3D Transferase(Phosphotransferase) domain 1 955 1157 - -
Spst1g00506 1157 Gene3D - 393 518 IPR036426 -
Spst1g00506 1157 Gene3D Phosphorylase Kinase; domain 1 58 170 - -
Spst1g00506 1157 Gene3D Phosphorylase Kinase; domain 1 845 954 - -
Spst1g00506 1157 Pfam PAN-like domain 703 765 IPR003609 -
Spst1g00506 1157 ProSitePatterns Protein kinases ATP-binding region signature. 886 908 IPR017441 GO:0005524
Spst1g00506 1157 Gene3D Hepatocyte Growth Factor 711 788 - -
Spst1g00506 1157 ProSiteProfiles Bulb-type lectin domain profile. 390 518 IPR001480 -
Spst1g00506 1157 Pfam Protein kinase domain 883 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00506 1157 Pfam Protein kinase domain 99 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00506 1157 Pfam D-mannose binding lectin 446 531 IPR001480 -
Spst1g00506 1157 ProSiteProfiles PAN/Apple domain profile. 703 787 IPR003609 -
Spst1g00506 1157 SMART serkin_6 880 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00506 1157 SMART serkin_6 96 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00506 1157 SUPERFAMILY Protein kinase-like (PK-like) 859 1156 IPR011009 -
Spst1g00506 1157 PANTHER OS07G0415500 PROTEIN 378 1157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00506 Spst-Chr1 6563028 6569046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00506 86 354 Trihelix Transcription Factor Family AT5G38560 40.217 3.43e-56 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst1g00506 Pkinase 1.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00506 - - gmx:100783758 1241.87