Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00497 ATGGGTGGGGATGGGGATGAGGAGCGCAAGGTTTACACTTTGGCCCAAGTTTCTGAGCACAACAACTCCAAAGATTGCTGGCTTATCATTGATGGCAAGGTTTATAATGTCACAAAGTTCTTAGATGACCACCCTGGTGGTGATGATGTCTTGTTGTCTTCCACAGGGAAAGATGCCACTGATGACTTTGAGGATGTTGGTCACAGTAAGAGTGCTAGAGCCATGTTGGTTGATTTATATGTTGGAGACATTGATCCAGCAACCATACCGGCCAAGCCTAAGCAAACTCCTCCAAAACCACTTCAAAATAATCAGAACACATCATCAAATTTCCTGATCAAGATGCTGCAGTTTATAGTTCCCCTGATTGTCTTGGGTGTTGCGGTTGTTTTCTGCTCCTTAAAGTTCTGTCTACACAAAGCATTGTCAATGCCAATTAGTGCACTTGGACTACTGGTTAAGTTTTTGAAAATGGGAAGCATCAAAAGAGAGAAAAGGGTGTTAAAACTTGTTCATCCTGGTAAACATATTGAGGTTCACAGAGAGCCAGTAAGAGCAGAAGAGGTCATGAAAAAGAACCCTAGACACTGCATAACTAGGCCAGATGTTTTTAAGTTCCCATGGATTGTGGTCAAACCTGAGTCAGTTTTGCTTCCGGGGAGTGTCTTCCTCATTGTCCCCAATCACACAATCTATGACCTGTTGAAGGCCACCACATCACAAAGCATTAGCTTTCAATCACAAGAACAATCACCCTTTTCACAACAAAACCAACGACTCAAACAAGATTATCATGACAGCTCTTATAATGGGATAAATTCCAAACCCCAGATGCACAATCAAAACATCAGGCTTTCATTCCTTTCTCCTATCTCCCAAAGAAACTCTAACATTGTAAGTGAGACATTGTCTCAAGACATGGAAAATGTGTGCACATATCGTGAAAGATCACAAAACCAATCCCATTTTGAGATTTGGCCAAAAGTGGCTAGCTATGAAGAAAACAGCCAGAAGAGAATGGAACTAATAGATGCCTCAACTTTTGAGTTTAGACCTTATTTCAAGGCCTTGAAATATTATGAAAAGTACTATAGCATGGACATGAGGACTGAAATGCAAGACCTCAAGAAGAATGATGTTAACATAGAGTTTGTGTCAAGTGAACAAGTTACCTTACTGAAATCTTGTTTAAGGAGACCAAATAGCATGCGTAAGAAGCTTAAGCTTAAGGTGTCATTCAACATACAAATCAAAAACCAGTGA 1263 0.4046 MGGDGDEERKVYTLAQVSEHNNSKDCWLIIDGKVYNVTKFLDDHPGGDDVLLSSTGKDATDDFEDVGHSKSARAMLVDLYVGDIDPATIPAKPKQTPPKPLQNNQNTSSNFLIKMLQFIVPLIVLGVAVVFCSLKFCLHKALSMPISALGLLVKFLKMGSIKREKRVLKLVHPGKHIEVHREPVRAEEVMKKNPRHCITRPDVFKFPWIVVKPESVLLPGSVFLIVPNHTIYDLLKATTSQSISFQSQEQSPFSQQNQRLKQDYHDSSYNGINSKPQMHNQNIRLSFLSPISQRNSNIVSETLSQDMENVCTYRERSQNQSHFEIWPKVASYEENSQKRMELIDASTFEFRPYFKALKYYEKYYSMDMRTEMQDLKKNDVNIEFVSSEQVTLLKSCLRRPNSMRKKLKLKVSFNIQIKNQ 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00497 420 Pfam Cytochrome b5-like Heme/Steroid binding domain 13 84 IPR001199 -
Spst1g00497 420 Gene3D - 2 89 IPR036400 -
Spst1g00497 420 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 40 47 IPR018506 GO:0020037
Spst1g00497 420 PRINTS Cytochrome B5 signature 34 44 IPR001199 -
Spst1g00497 420 PRINTS Cytochrome B5 signature 72 84 IPR001199 -
Spst1g00497 420 PRINTS Cytochrome B5 signature 44 58 IPR001199 -
Spst1g00497 420 PRINTS Cytochrome B5 signature 59 66 IPR001199 -
Spst1g00497 420 SMART Cyt_b5_2 12 85 IPR001199 -
Spst1g00497 420 PANTHER CYTOCHROME B5 7 130 - -
Spst1g00497 420 FunFam Cytochrome b5 type B 6 89 - -
Spst1g00497 420 Pfam PADRE domain 162 301 IPR025322 -
Spst1g00497 420 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 9 85 IPR001199 -
Spst1g00497 420 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 8 94 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00497 Spst-Chr1 6451229 6459367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00497 1 128 NADPH P450 reductases AT5G48810 64.615 1.05e-57 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00497 K23490 - gmx:100785360 209.92