Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00482 ATGAAAAGGGGCAAGCAATGTTTCATACGTTTCAACAATGGTGAAACATCAGAACAAACTGACAACAAAGTAATTGAAGAACTGTCACAAGTGAAACTCCAGGAGCTGCTACTGTTTGATTTCGAAAAGCTTGCAACAGCCACAAACAACTTCCACCCGTCCAACAAACTTGGGCAGGGCGGTTTTGGTCCTGTGTACAAAGGGAAACTGGAAGATGGACAGGAAATAGCTGTTAAAAGACTTTCTAGAGCCTCTGGACAAGGTCTAGAAGAATTCATGAACGAAGTAGTCGTGATTTCCAAGCTTCAGCACCGCAATCTTGTAAGACTTCTTGGCTGCTGTATTGAAGGTGACGAAAAGATGCTACTATATGAATACATGCCAAACAAAAGTCTGGACGTGTTTATCTTTGGTTAG 417 0.4197 MKRGKQCFIRFNNGETSEQTDNKVIEELSQVKLQELLLFDFEKLATATNNFHPSNKLGQGGFGPVYKGKLEDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLLYEYMPNKSLDVFIFG 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00482 138 SUPERFAMILY Protein kinase-like (PK-like) 29 137 IPR011009 -
Spst1g00482 138 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 126 - -
Spst1g00482 138 Gene3D Phosphorylase Kinase; domain 1 10 126 - -
Spst1g00482 138 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 137 - -
Spst1g00482 138 Pfam Protein tyrosine and serine/threonine kinase 54 136 IPR001245 GO:0004672|GO:0006468
Spst1g00482 138 ProSiteProfiles Protein kinase domain profile. 51 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00482 Spst-Chr1 6262983 6263498 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00482 8 137 Receptor kinase-like Gene Family AT4G23190 52.308 8.02e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst1g00482 PK_Tyr_Ser-Thr 4.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00482 - - gmx:100777856 232.646