Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00471 ATGGTAGACATCCATGTTTACCTTGTTCTGTTCTTCACGTGGTTCATTTCGACCCTTTTCATTCGTTCAATCTTCAAAAAACCGCAGAATCTGAGACTCCCTCCTGGCCCTCCCATCTCAATACCCTTACTAGGGCACGCGCCCTATCTCCGTTCCGTGCTTCACCAAGCGCTGTACAAACTCTCTCTACGATATGGCCCATTGATCCACATCACCATCGGGTCCAAACACGTCGTTGTGGCGTCCTCCGCGGAGACTGCCAAAGAGATCCTCAAAACCTCCGAGGAGGCGTTCTGTAACCGCCCCTTAATGATTGCGAGCCAGAGTTTAACGTACGGCGCCGCTGACTACTTTTTCATTCCCTACGGAACCTACTGGCGCTTCCTGAAGAAGCTCTGCATGACGGAGCTTCTCAGCGGGAAGACGCTGGAGCATTTTGTTGGCATTCGTGAGAGCGAGGTTGAAGCGTTTTTGAAGCGGATGTTGGAGATTTCCGGGACGGGGAAGGAAGTGGTGATGAGGCAAGAACTGATAACGCACACGAATAATATTATCACGAGGATGATCATGGGGAAGAAGAGCAACGGTGCGAATGATTTTGTGGCGCAGTTGAGGAAGGTGGTGAGGGAGGTTGGGGAGTTGCTGGGGGCGTTCAACTTGGGGGACATTATGGGGTTTGCGAGGCCTTTTGATATTCAGGGGTATGGGAAGAAGAACATGGAGACGCACCAGAAGGTGGATATGATGATGGAGACGGTGCTGAAGGAGCACGAAGAGGCGAGGGCCAAAGCGGGTGGTGACAGTGATAGGAAGAAGGATCTCTTCGACATTCTCTTGGACCTCGTTGAAGCTGAGGGTGCTGACAATAAACTCACAAGGGAAAGTGCCAAAGCCTTTGCTCTGGACATGTTCATCGCTGGCACAAACGGCCCGGCGAGTGTTATGGAATGGTCCCTGGCGGAGCTGGTGCGAAACCCTCTGGTGTTCAGGAAGGCGAGAGAGGAGATAGAGTTTGTGGTGGGGAAGGAGAGGCTGGTGAAGGAGTCAGACATTCCCAACCTCCCTTACCTGCGAGCAGTGGTGAAGGAAACTCTGAGACTGCACCCTCCCACCCCAATCTTCGCGCGCGAAGCCATGCGCGGGTGCCAGGTCGACGGCTACGACATCCCTGCGCACTCCACCATCATGATCAGCACGTGGGCCATCGGCAGGGACCCCAAATACTGGGACAAAGCCCTGGAGTACAACCCAGAGAGATTCTTGGTCTCGGATGAACCTGGAAAAAGCAAAATCGAGGTGAGGGGACAGTACTACCAGCTTCTACCTTTCGGAAGCGGAAGAAGAAGCTGCCCCGGAGCCTCACTTGCGTTGCTCGTTATTCAAGCGACGCTGGCGAGTTTGATCCAGTGCTTCGATTGGGTGGTGAACGACGGGAAGAGTCACGACATTGACATGAGCGAGGAGGGAAGGGTGACAGTGTTTTTGAAGAAACCGCTTATGTGCAAGCCTGTTCCCCGGTTCACTCCCTTCGCTGCATGA 1539 0.5361 MVDIHVYLVLFFTWFISTLFIRSIFKKPQNLRLPPGPPISIPLLGHAPYLRSVLHQALYKLSLRYGPLIHITIGSKHVVVASSAETAKEILKTSEEAFCNRPLMIASQSLTYGAADYFFIPYGTYWRFLKKLCMTELLSGKTLEHFVGIRESEVEAFLKRMLEISGTGKEVVMRQELITHTNNIITRMIMGKKSNGANDFVAQLRKVVREVGELLGAFNLGDIMGFARPFDIQGYGKKNMETHQKVDMMMETVLKEHEEARAKAGGDSDRKKDLFDILLDLVEAEGADNKLTRESAKAFALDMFIAGTNGPASVMEWSLAELVRNPLVFRKAREEIEFVVGKERLVKESDIPNLPYLRAVVKETLRLHPPTPIFAREAMRGCQVDGYDIPAHSTIMISTWAIGRDPKYWDKALEYNPERFLVSDEPGKSKIEVRGQYYQLLPFGSGRRSCPGASLALLVIQATLASLIQCFDWVVNDGKSHDIDMSEEGRVTVFLKKPLMCKPVPRFTPFAA 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00471 512 Pfam Cytochrome P450 34 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 Gene3D Cytochrome P450 25 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Spst1g00471 512 PANTHER CYTOCHROME P450 98A9 9 506 - -
Spst1g00471 512 FunFam Cytochrome P450 family protein 25 501 - -
Spst1g00471 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00471 512 CDD CYP93 66 503 - -
Spst1g00471 512 SUPERFAMILY Cytochrome P450 30 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00471 Spst-Chr1 6153262 6156070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00471 1 506 Cytochrome P450 AT5G06900 39.882 1.80e-132 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00471 K24188 K15814 gmx:100037459 899.042