Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00459 ATGGGTAAGATTGAACTAGTAGAGAAAGTTGTAATTGTTCCTGAGCAACCTACACCCCACAAGAGAATGTTTCTGTCAAATATTGACCTGTCCCTTGTTGTTTACCAAGACTCTGCCTCCTTTTTTGACCCTCCAAGCACCCAAATGAGTTTCAGTGAGATTTGTAACAGATTATACACTGCACTCAGTAAAATGCTTGTGCAATATGACTTTATGGCTGGCAGACTAGTGCCAAGTTTGGAAGAGGCTCAGAGATTTGAAATTGACTGTAATGGTGCTGGCATTGTGGTTGCAGCTGCAAGAACTGACAGAAAATTGAGTGAATTTGGTGTGATTTCTGCACCTAATCCAGAGTTGAGGGAATTAGTTGTTTTCTTGCATGAAGGGTGTGATCAAGACACTGGCCTGAAAGAAAAACCCCTTGCATCCTTACAGCTGACTCAGTTTGGTTGTGGAAGTTTGGCACTTGCTTCTCACTACAACCACTGCACACTGGACGGTTTTGCAATAAGAGATTTTGAGGTGAACTTAGGTGCATTAACACGTGGTGAGGACCTCATCATAGTACCTAATGCAGATAGAACACTGCTGAGAGCTCGAAGCCCTCCAAATGTAAGCCATCCACATTTTGAGTATTCAAAATCTGCTGACACACACAACAACTTGTTCACTCTCCGAGGCAAAAGTAGTACCAATGTCACACAATCCGTTCCAGAAAGCCAGATTCATGTGCTTTATTTGTCGCCACAAAGCATTGCTAGCTTCAAAAAGAAAGCCCTGGAGGACGACACCTTAAAGAACATCACCACTTTTCAGGTTGTTGCTGCAAAAATATGGAAGGCAAGAAGCATTGCAACAAGGATGTCAGAGGAAAATGTGTCCACAATTCTATTTCCAGTGGATGTGAGGAAAAGGGTTGTTCCTGAACTCCCAGATGGCTTTGCAGGAAACGCATTGGTGCCTGGTTTTGCAAGAGCAACTGTGAGGGAGCTGAAGGAGCTAGAAGATGCTTGTCACATAAGCAAAGTGCAAGAAGGGCTTGAAAGATTGGATGATGAGTACATTAAGTCAGGGATAGATTGGTTAGAGGTGAACAAAGGGGCACCTTGTATGGAAGATAGTTTCTCCTTAGTGGCATGGTGGAGATTGGGGTTAGAGGAGCAACTTTTTGCATGGGGTAGACTAAAGTGTGCCACCCCACTACAGGTTAAGCCTGGTTTGGTCATGCTATTGCCAGGGCCACAAGGTCAAGGGGGCATTAACATATGCCTGGATTTACCTGAGGATCAAATGCAAGAGTTTAGCAGGATAGTGCTAGAAACTTAG 1326 0.4397 MGKIELVEKVVIVPEQPTPHKRMFLSNIDLSLVVYQDSASFFDPPSTQMSFSEICNRLYTALSKMLVQYDFMAGRLVPSLEEAQRFEIDCNGAGIVVAAARTDRKLSEFGVISAPNPELRELVVFLHEGCDQDTGLKEKPLASLQLTQFGCGSLALASHYNHCTLDGFAIRDFEVNLGALTRGEDLIIVPNADRTLLRARSPPNVSHPHFEYSKSADTHNNLFTLRGKSSTNVTQSVPESQIHVLYLSPQSIASFKKKALEDDTLKNITTFQVVAAKIWKARSIATRMSEENVSTILFPVDVRKRVVPELPDGFAGNALVPGFARATVRELKELEDACHISKVQEGLERLDDEYIKSGIDWLEVNKGAPCMEDSFSLVAWWRLGLEEQLFAWGRLKCATPLQVKPGLVMLLPGPQGQGGINICLDLPEDQMQEFSRIVLET 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00459 441 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 434 - -
Spst1g00459 441 Gene3D - 2 214 IPR023213 -
Spst1g00459 441 Gene3D - 221 439 IPR023213 -
Spst1g00459 441 Pfam Transferase family 3 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00459 Spst-Chr1 6026917 6029054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00459 3 440 Monolignol Biosynthesis Gene Families AT5G48930 28.571 6.65e-58 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00459 K15400 - gmx:100801822 762.681