Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00454 ATGAGAGAGCAACGCTTAGATACCTTCTACGCTAAGCTTCGTGACTCGGCGTTGTCTTCTTCCTCTACGCCTGTTCTCATCTTCCCCTCGACCTCCGACGTGGATTCCCTCTGCGCTCTAAAAATCATCTTCCACATTCTCGAATCCGATTCCATTCAATACGCTTGCTACCCCGTCTCCACCTTCCGCGAGATCCACAAATACACCTCCTCTGCCACCAGCGACGACCCTCTATCCATCGTTTTGGTCAATTGGGGTAATCACCGGGACCTGCGCAAAGCACTCAGCCTTGGCCCCAACGCCCGTGTCTTTGTCGTCGACAGCCACCGCCCCATACACCTCCGTAACCTCAGCGATCGAAACGACGCCGTTGTCGTCCTTTTTACTAAATACGACGAGCAGCAGTCCGATCTCGCATATGACTTTGACCTCACCACGCTAGCCAACGCCGCCGCTGCTAACGGAGACGACTCCGAGTCTGAACCCGAATCTGAATCCGAATCTGATGATGACGGAAACGAATCTAGGAAGAGGAGAAAGAGAAACGACGATGACGAGGAGGATCCGATCAAACTGTACCGGAAGCTGAAGAAGGACTATTACCGGTTGGGGACTTTCCATGGGAAGCCCTCCGGATGCTTGATGTATGAGCTCGCTGACTCTCTCAGGAAGAACACGAATGAGTTGCTCTGGCTCGCGTGCGTTTCGCTCACGGATCAGTTCGTGCACGAAAGGTTAAGTGATGAGAGGTACCAAGATGGGGTTATGGAACTTGAGCAGCATATAAACAGTTCTGGTAATTTGGATGTGGTTACTTCAGTTACACTCAAGGATGGTACGAAAATTCGCGCTCCGAATTCTTCGCGGATCACTTATGAGGAACAGCCAAGGCTTATGCTGTTGCAGGAGTGGAGCTTGTTTGACTCCATGATGTGCTCTTCGTATATTGCCACCAAGTTGAAGACGTGGAATGAGAATGGGGTGAAGAAGTTGAACCTTCTGTTTGGGAGGATGGGGTTTGCTCTTGCTGATTGCCATCAAAAGTTTCAGCACATGAATGTGGAGGTGAAGCGCAAGATGAAGGAGGAGTTTGAGCGTTTTTTGCCTGAGTACGGACTCACTGATTTTTACTACAGGAGTTTCCAGAGAACCCTTAAGTATAGTTCTAAGGTTTCTGCTGCGGATGTGGTGTATGGTGTGACGGCGTTGCTTGAGTCTTTTGTGAAATCGGATGGTTCTAGTGCTTCTAAGCAGTTTGGTGTGGCCTATGATGCACTTTCTTTGAACAATATTGACAACTTAAGGACTGGGATGCAACATGCTATTAAGATTCAGAGGGCCATTTTAAGGCAAGGGAGTGCTGCGATTACTAAGAATGGGTGCATAAGGAGTGGAAGGAGTTTCCGGTGGCTGAAGCTGGAGGATTCAAGTGATGCTAAGTTGTTGGGGTACCCGCAAGCATTGACTAAGTTTTGTTATTTTCTTATGGATGCTCTGAGGGAGAAGGGGGCGACAATGAAGCCTTTGCTTTGTGCTTGTGTATCTCAAGAGCCTGGGAAGGTGCTGATTGTAGGGGTTTGTGGGAGGCCACGTTTGGCTGGGGCTAGAGGGAATGCATTTGGGATTGCATTTAGGACTGCAGCAGAGGAGATCGGAACTGAGTTCTTCCATGAGTTATTTGAATCATCATGGATTGTTCTGGATACTTCAGCTGTGAATTCCTTCATGGTTAGGTTGATTGAAAAGCTGTGA 1752 0.4874 MREQRLDTFYAKLRDSALSSSSTPVLIFPSTSDVDSLCALKIIFHILESDSIQYACYPVSTFREIHKYTSSATSDDPLSIVLVNWGNHRDLRKALSLGPNARVFVVDSHRPIHLRNLSDRNDAVVVLFTKYDEQQSDLAYDFDLTTLANAAAANGDDSESEPESESESDDDGNESRKRRKRNDDDEEDPIKLYRKLKKDYYRLGTFHGKPSGCLMYELADSLRKNTNELLWLACVSLTDQFVHERLSDERYQDGVMELEQHINSSGNLDVVTSVTLKDGTKIRAPNSSRITYEEQPRLMLLQEWSLFDSMMCSSYIATKLKTWNENGVKKLNLLFGRMGFALADCHQKFQHMNVEVKRKMKEEFERFLPEYGLTDFYYRSFQRTLKYSSKVSAADVVYGVTALLESFVKSDGSSASKQFGVAYDALSLNNIDNLRTGMQHAIKIQRAILRQGSAAITKNGCIRSGRSFRWLKLEDSSDAKLLGYPQALTKFCYFLMDALREKGATMKPLLCACVSQEPGKVLIVGVCGRPRLAGARGNAFGIAFRTAAEEIGTEFFHELFESSWIVLDTSAVNSFMVRLIEKL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00454 583 PANTHER CDC45-RELATED PROTEIN 2 582 IPR003874 GO:0006270
Spst1g00454 583 Pfam CDC45-like protein 25 186 IPR003874 GO:0006270
Spst1g00454 583 Pfam CDC45-like protein 193 407 IPR003874 GO:0006270
Spst1g00454 583 Pfam CDC45-like protein 411 581 IPR003874 GO:0006270
Spst1g00454 583 MobiDBLite consensus disorder prediction 152 186 - -
Spst1g00454 583 MobiDBLite consensus disorder prediction 170 186 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00454 1 583 Core DNA Replication Machinery Family AT3G25100 70.500 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00454 K06628 - gmx:100777346 992.26