Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00440 ATGGCTGCCAATTTCTGGACATCATCTCATTACAAGCATCTTTTGGATCAGGAAGATGTGGATATGGTGAATACACTTGACAAGGAAAAGGGTATCACACTGGAGGATTTTAAGCTCATTAAGATGCACATGGCTAATTATATTTTGAAATTGGCACAACAAGTAAAAGTGAGGCAGAGGGTTGTGGCCACAGCAGTTACATACATGAGGCGTGTTTACACCAAGAGGAGTATGGCAGAATATGATCCACGGTTGGTAGCTCCGACATGCTTATACCTAGCATCAAAAGCAGAAGAAAGCACAGTGCAGGCTCGGCTTCTTGTATTTTACATTAAAAAATTATATGCTGATGAGAAGTATAGATATGAAATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAAGCTCTTAATTATTACTTGGTTGTATACCATCCATACCGTTCACTCTCTCCGTTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACCCAACTAACTTGGGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCCGCATTTGATTGCTTTAGCTTGCATATACATTGCTAGTGTACTCAGGGAGAAAGACACCACTGCTTGGTTTGAAGAACTTCGGGTTGATATGAACGTGGTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCCATAGAATGTTCACTGATGAAAGAATCAATGCTGCCCTCCAGAAGTTGACCATGAGACCCTAA 762 0.3963 MAANFWTSSHYKHLLDQEDVDMVNTLDKEKGITLEDFKLIKMHMANYILKLAQQVKVRQRVVATAVTYMRRVYTKRSMAEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYADEKYRYEIKDILEMEMKILEALNYYLVVYHPYRSLSPLLQDAGLNDLNMTQLTWGLVNDTYKMDLILVHPPHLIALACIYIASVLREKDTTAWFEELRVDMNVVKNISMEILDFYESHRMFTDERINAALQKLTMRP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00440 253 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Spst1g00440 253 PANTHER CYCLIN 19 236 IPR043198 GO:0006357|GO:0016538
Spst1g00440 253 Gene3D - 19 143 - -
Spst1g00440 253 SUPERFAMILY Cyclin-like 146 241 IPR036915 -
Spst1g00440 253 Gene3D - 7 240 - -
Spst1g00440 253 PIRSF Cyclin_C_H_G 1 253 - -
Spst1g00440 253 FunFam cyclin-C1-2-like isoform X1 19 143 - -
Spst1g00440 253 Pfam Cyclin, N-terminal domain 42 142 IPR006671 -
Spst1g00440 253 SMART cyclin_7 149 229 IPR013763 -
Spst1g00440 253 SMART cyclin_7 46 136 IPR013763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00440 60 199 Core Cell Cycle Gene Families AT5G27620 29.333 3.74e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00440 K15161 - gmx:100784345 471.085