Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00431 ATGGATTTGTTTGACCCAGTAGCTGATAATGCTAGAGGAATTATAGAGATGAGTGGGCAGCGTGGAAGTGCTCAAGGAATGACTAACGTCCTTGATGCCATAGGAACAGAACCAAAGCTTCCACCAAAGGATTTGCTATCGGTTTTGCTGCTCTTGCATCTGTCCTTTAGTGCTTATATGGTCCTATGGATGAGGTTAATGCATGTGCTCATGGAATCTTCTAAACAGGTTGATATCGCAATTTCTGAACTTTTCATTATTGAGTTGCTGGCTTTCCTGCTTTGGGACTGTTTGTTTACTGCACAAGAGGTTGGAAACAATTTGAGAGGGCAATTCATGGAGAGACCTAGTACAATGGAGTACACAAACAAACCAGATTACAGTTGTTGTGTTGATATTGTAGTGTCTACATCACTGAGAAACATGATAATTCCTGATGTTTTGGCAATCATTTCACCTATTGTAGTTGGTCTTCTTTCCCAAATTCTGGGTTACTATCAGATTACCATATACTGGTGGTGTCTGGAATTATGCAAAGAAGTAAATTGGAACTTGAGCTCTAGGAGGCAGGGAAAGTTGAAAAATAGTGCTGTTGTGGATTTCAAAAATGAGATTGTGGCCTCTCAAGCACAACGTCAACTAAATGGAGGCCTCCCGATTCCTGAGCCAATTGCTGATAGACTTGGTGTCAATTATCCTTTTCCTCCTCATCTCGAGTATGCTGCTGCTTCTTATTTTGAAGTTCTTGTTAGCAACCACAACAATTCGCCGCGTGTCTGCTTGATCGCTCTGCCACCGTTGATCTCTGCCTCTAGTCATCACAGCCGTTCACTGACCCGCGATTCAACTTTATCCACTTTCGTTTATCCTTTTTTTTCCATTTCAACCCCGCAACTTTACACGTCGATTTTCTCCTCAGCGTTTTCTCTTTCCTCTTCTTCTCTCTCAAGCTTTTCTGGTTTCTTCGTTGTTGTGGTTTCTGAAGCGAAGGAAAATTTAATGGCTGAGGTTTTGACCAAGGCGAGTTTGGTTTCTTCCTGGCATGTTAGTAGTCAACGCCACCATCGAAGAGTATCGACGGTTTCCAATTCTTCTAGTTTCGTTTCTGGCGTCGGAAGTTTCCCTTCTCTCAAGTTAAAGTCTCATGTTCTCAGATCTTGGTCCCCTTCTTCTGGGTTTCAGGGTAAAAGGCTCGTCTTTCATGTCAATAGAGGAATACCCAACAGGGCCAGTTCGCGGTTGAGAGCTTCAACTGCGGCTCAGATGACCCTTCGAATAGGGAAAGTTCAGAAATGGTGGGAAAAGGGGCTTCAACCCAACATGAAAGAGGTGACTTCGGCCCAAGATCTTGTTGAATCACTGTTAAACGCAGGGGACAAGTTGGTGGTGGTTGATTTCTTTTCTCCTGGTTGTGGTGGCTGCAAAGCCCTTCACCCTAAGATATGTCAACTGGCAGAGATGAATCCTGATGTTCAATTCCTTCAGGTGAACTTTGAGGAGCATAAGTCCATGTGTTATAGCCTCAATGTCCACGTTCTTCCCTTCTTCCGCTTTTACAGGGGTGCTCATGGTCGATTATGTAGCTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAAAGATGCATTGGCCAAACACACCACAGATAGATGCAGTTTGGGCCCAACCAAAGGGTTAGAGGAGAAAGAGCTCCTAGCTCTTGCTGCCAACAAAGATCTTTCCTTCACCTACTTGCCAAAACCTTTACCACCTGCACACGAAAATGAAGAGTTGGCAACTACTCCTGAACTTAGTCCAGAATCTCTTCCTTTACCTTCATTGACCCTCAATTCTGAGGTATCCAAAGAAAGAATCTTGACCATTGCTGGGAGATGA 1875 0.4389 MDLFDPVADNARGIIEMSGQRGSAQGMTNVLDAIGTEPKLPPKDLLSVLLLLHLSFSAYMVLWMRLMHVLMESSKQVDIAISELFIIELLAFLLWDCLFTAQEVGNNLRGQFMERPSTMEYTNKPDYSCCVDIVVSTSLRNMIIPDVLAIISPIVVGLLSQILGYYQITIYWWCLELCKEVNWNLSSRRQGKLKNSAVVDFKNEIVASQAQRQLNGGLPIPEPIADRLGVNYPFPPHLEYAAASYFEVLVSNHNNSPRVCLIALPPLISASSHHSRSLTRDSTLSTFVYPFFSISTPQLYTSIFSSAFSLSSSSLSSFSGFFVVVVSEAKENLMAEVLTKASLVSSWHVSSQRHHRRVSTVSNSSSFVSGVGSFPSLKLKSHVLRSWSPSSGFQGKRLVFHVNRGIPNRASSRLRASTAAQMTLRIGKVQKWWEKGLQPNMKEVTSAQDLVESLLNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNFEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTTDRCSLGPTKGLEEKELLALAANKDLSFTYLPKPLPPAHENEELATTPELSPESLPLPSLTLNSEVSKERILTIAGR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00431 624 MobiDBLite consensus disorder prediction 584 605 - -
Spst1g00431 624 SUPERFAMILY Thioredoxin-like 430 546 IPR036249 -
Spst1g00431 624 PANTHER THIOREDOXIN, MITOCHONDRIAL 405 577 - -
Spst1g00431 624 Gene3D Glutaredoxin 434 553 - -
Spst1g00431 624 ProSiteProfiles Thioredoxin domain profile. 410 548 IPR013766 -
Spst1g00431 624 Pfam Inorganic H+ pyrophosphatase 1 160 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Spst1g00431 624 Pfam Thioredoxin 452 522 IPR013766 -
Spst1g00431 624 FunFam Thioredoxin-like 1-2, chloroplastic 430 548 - -
Spst1g00431 624 CDD TRX_family 457 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00431 Spst-Chr1 5717971 5728120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00431 1 166 Primary Pumps ATPases AT1G78920 50.847 1.19e-37 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00431 - - var:108327816 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00431 1 5717971 5728120 Spst1g00431 1 5717971 5728120 ECH