Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00428 ATGCTGACTAAAAGCTACATTGTCCTCTATATACATGCTGATTCAGTATTGGTGGTTCAGAGTTATTTTTTGAGAATGGGGTTTTCATCTCTCATTAGTGTTCTCCTCTTGCTATTGCCTGCACTGTCTTCCTCCCAGTATCTTGGGAACATCCTTCTAACTAATCGTAAGATATTCCCCATACAAGAAGAAGCCGTTACCTCTTACGCTGTGATTATTGATGCTGGTAGCACTGGGAGTCGTGTACATGTCTTCCATTTTGACCAGAGCTTAGATCTACTTCGCATTGGCAATGATCTTGAGTTCAGTGGAAAGGTCACACCCGGTTTGAGTTCTTATGCCGATGTTCCCAAAAAAGCAGCAGAATCACTGATTCCACTCTTGGATGCAGCTGAAAATGTTGTCCCTGAGGATCTACACCCAAAGACACCCCTTAAGCTTGGGGCAACAGCGGGTTTAAGGCTGTTGGAAGGGGATGCTGCTGAAAATATACTGCAAGCGGTCAGGGATATGTTCAAGAACAGGAGTACTCTGAACGTTCAGGCAGATGCAGCAACCATTATTGATGGGACCCAAGAAGGGTCATATCTTTGGTTGACAGTTAACTATCTAGTGGGGAAGTTGGGAAAAAAGTTTAGTAAGACAGTGGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGACATATGCTGTCTCAAGGAACACAGCAAAAAATGCACCAAAGGTACCCGATGGAGAAGATCCATACATAAAGAAGATGTCTGTCAAGGGAAAAAAATATGATCTCTATGTTCACAGTTACTTGCGTTTTGGTAGAGAAGCATTTCGTGCTGAGACTTTGAAGGTCACTTATGGATCTGCTAACCCTTGCATCTTAGCTGGGTTTAATGGGACCTACACATATTCAGGAGCGGAGTATGAAGTATACCCTCCAATTTCAGGGCCCAGCTATGAAGCATGCAGAGAGCTAGTCCTTGAGACTCTCAAAGTGAATGAGCCATGTTCGCATCCCAATTGCACTTTTGGTGGTATATGGGATGGGGGAAGAGGAAGTGGACAGAAAACTATCTATGCTACTTCATCATTCTTTTACCTGTCCCAAGATGTTGGTATGTTTGATGCAAAAGCACCCAATGCCAGAGTTCGTCCTGCAGATTTTGAGAGTGCAGCTAAGAAATCTTGTGGACTAACATTTGAAGATGCCAAAACCGCTTATCCTCTTCTTTCAAACGCAAGAATTCCGTATGTGTGTTTGGATTTAACATACATGTATTCTTTGCTGGTTAATGGATTTGGCCTGGAGCCTCTGCAAGAGATCACAGTGGCAAATAAAATTCTATACGAGGATGCTTTAGTGGAAACAGCATGGCCTCTTGGCACTGCCATAGAAGCCATATCAGCATTGCCTAAATTTGAAAGGTTTATGTATTTTATGTAA 1440 0.4285 MLTKSYIVLYIHADSVLVVQSYFLRMGFSSLISVLLLLLPALSSSQYLGNILLTNRKIFPIQEEAVTSYAVIIDAGSTGSRVHVFHFDQSLDLLRIGNDLEFSGKVTPGLSSYADVPKKAAESLIPLLDAAENVVPEDLHPKTPLKLGATAGLRLLEGDAAENILQAVRDMFKNRSTLNVQADAATIIDGTQEGSYLWLTVNYLVGKLGKKFSKTVGVVDLGGGSVQMTYAVSRNTAKNAPKVPDGEDPYIKKMSVKGKKYDLYVHSYLRFGREAFRAETLKVTYGSANPCILAGFNGTYTYSGAEYEVYPPISGPSYEACRELVLETLKVNEPCSHPNCTFGGIWDGGRGSGQKTIYATSSFFYLSQDVGMFDAKAPNARVRPADFESAAKKSCGLTFEDAKTAYPLLSNARIPYVCLDLTYMYSLLVNGFGLEPLQEITVANKILYEDALVETAWPLGTAIEAISALPKFERFMYFM 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00428 479 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 32 469 IPR000407 GO:0016787
Spst1g00428 479 Pfam GDA1/CD39 (nucleoside phosphatase) family 66 470 IPR000407 GO:0016787
Spst1g00428 479 CDD NBD_sugar-kinase_HSP70_actin 71 230 - -
Spst1g00428 479 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 188 203 IPR000407 GO:0016787
Spst1g00428 479 FunFam Apyrase 1 189 447 - -
Spst1g00428 479 Gene3D Exopolyphosphatase. Domain 2 189 451 - -
Spst1g00428 479 Gene3D - 69 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00428 Spst-Chr1 5655470 5658194 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00428 68 468 Calmodulin-binding Proteins AT3G04080 53.980 1.21e-148 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00428 K14641 - gmx:100781628 671.389